Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   FSA28_RS05365 Genome accession   NZ_CP044495
Coordinates   1085058..1086803 (-) Length   581 a.a.
NCBI ID   WP_002290837.1    Uniprot ID   -
Organism   Streptococcus mutans strain UA140     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1080058..1091803
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FSA28_RS05345 (FSA28_0836) - 1081252..1081938 (+) 687 WP_002290833.1 phosphopantothenate--cysteine ligase -
  FSA28_RS05350 (FSA28_0837) coaC 1081931..1082470 (+) 540 WP_002262265.1 phosphopantothenoylcysteine decarboxylase -
  FSA28_RS05355 (FSA28_0838) - 1082545..1083117 (+) 573 WP_002262264.1 ECF transporter S component -
  FSA28_RS05360 (FSA28_0839) - 1083212..1084927 (+) 1716 WP_002290836.1 phospho-sugar mutase -
  FSA28_RS05365 (FSA28_0840) rcrQ 1085058..1086803 (-) 1746 WP_002290837.1 ABC transporter ATP-binding protein Regulator
  FSA28_RS05370 (FSA28_0841) - 1086800..1088533 (-) 1734 WP_002290838.1 ABC transporter ATP-binding protein -
  FSA28_RS05375 (FSA28_0842) - 1088543..1089157 (-) 615 WP_002272402.1 lysozyme family protein -
  FSA28_RS05380 (FSA28_0843) - 1089159..1090137 (-) 979 Protein_994 nucleoid-associated protein -
  FSA28_RS05385 (FSA28_0845) glyA 1090134..1091396 (-) 1263 WP_002264269.1 serine hydroxymethyltransferase -

Sequence

Protein


Download         Length: 581 a.a.        Molecular weight: 65362.10 Da        Isoelectric Point: 9.6523

>NTDB_id=343020 FSA28_RS05365 WP_002290837.1 1085058..1086803(-) (rcrQ) [Streptococcus mutans strain UA140]
MKARNNKNTLKRLTADFLKQRILVFLALLGTLIQVSLTVYLPVLIGQAVDAVLAKNVQKILPTILISMILVVAFNTIIQW
INPLIYNRLVFTYSQKLRQNIIEKLYRLPLSYLDKHSSGDLVSRITTDVEQLSNGLLMVFNQFFVGILTILLTIITMAKL
DFFMMVLVLVLTPLSLFVARFIAQKSYHLYQRQTRARGAFTQHIEESLRQESLIQSFNAQDQFIHTFDHLNSKYAKYSQG
AIFYSSTVNPATRFINALIYALLAGIGALRIMNGNFTVGQLTTFLNYVTQYTKPFNDISAVLSELQSALACAERLYMILD
ERDAKDDGKKELVSESVKGAITFDKISFGYDEKQTLIKNLSVNIPQGSKVAIVGPTGAGKSTLINLLMRFYDLREGQILL
DGQAITDYSKASYRQQIGMVLQETWLKTATVLENIAFGYPKASREQVIAAAKAANADFFIKQFPQGYDTFLADAGESLSQ
GQRQLLTIARIFVHIPKILILDEATSSIDTRTEILVQEAFEKLMKGRTSFIIAHRLSTIQSADLILVMVDGNIVEQGNHK
DLMQKKGVYYQMQTAQDSLES

Nucleotide


Download         Length: 1746 bp        

>NTDB_id=343020 FSA28_RS05365 WP_002290837.1 1085058..1086803(-) (rcrQ) [Streptococcus mutans strain UA140]
ATGAAAGCTAGAAATAATAAAAATACCTTAAAGCGCTTGACTGCTGACTTTCTTAAGCAGAGAATTTTGGTTTTTCTTGC
CTTATTGGGTACTTTGATTCAGGTCAGCCTAACGGTTTATCTCCCAGTTTTAATTGGGCAAGCAGTTGATGCTGTTCTTG
CTAAAAATGTCCAGAAAATCTTACCGACAATCTTGATTAGCATGATTCTTGTTGTTGCCTTTAATACCATTATCCAATGG
ATCAATCCCTTGATTTACAATCGTTTGGTTTTCACTTATAGTCAGAAGCTTCGGCAGAATATCATTGAAAAACTTTATCG
CCTCCCTTTATCTTATTTGGATAAGCATTCTTCAGGTGATTTAGTCAGTCGTATAACAACGGATGTTGAACAATTATCCA
ACGGACTTTTAATGGTTTTTAATCAGTTTTTCGTAGGTATTTTGACTATTTTGTTAACCATCATAACAATGGCGAAGCTA
GACTTTTTTATGATGGTTTTGGTACTGGTCTTAACACCACTTTCCTTATTTGTTGCTCGTTTTATTGCTCAAAAGAGTTA
TCATCTTTATCAAAGACAAACCAGAGCCAGAGGGGCGTTTACTCAACATATTGAAGAGAGTCTTCGTCAGGAAAGTTTGA
TTCAAAGTTTCAATGCTCAAGATCAATTTATTCACACTTTTGATCATCTAAATAGCAAATATGCTAAGTATTCACAAGGT
GCTATTTTCTATTCATCTACAGTCAATCCCGCGACACGTTTTATCAATGCCTTAATTTATGCGCTCTTAGCTGGTATCGG
AGCATTACGCATTATGAATGGGAATTTTACTGTGGGGCAATTGACCACTTTCTTGAATTATGTCACTCAATATACCAAAC
CCTTCAATGACATTTCAGCCGTTCTATCTGAATTACAAAGTGCTTTAGCATGTGCAGAACGTCTCTATATGATTCTCGAT
GAAAGGGATGCTAAGGATGATGGCAAGAAAGAATTAGTCAGTGAATCTGTTAAGGGTGCTATTACCTTTGATAAGATTAG
TTTTGGTTATGATGAGAAACAAACTCTGATTAAGAATTTGTCTGTCAATATTCCACAAGGTTCCAAGGTGGCTATCGTTG
GTCCTACAGGGGCTGGAAAATCAACTCTCATTAATTTGCTGATGCGATTTTATGATTTGCGAGAAGGGCAAATACTGCTA
GATGGGCAAGCAATCACTGACTATAGTAAAGCTTCTTATCGTCAGCAGATTGGTATGGTCTTACAAGAAACTTGGCTGAA
AACGGCTACTGTTTTGGAAAATATTGCCTTTGGTTATCCTAAAGCTAGCCGCGAGCAAGTGATTGCAGCGGCAAAAGCAG
CTAATGCCGACTTTTTTATAAAACAATTTCCTCAAGGTTACGATACTTTTTTGGCCGATGCAGGAGAATCCCTATCACAA
GGGCAAAGGCAATTGTTAACGATAGCACGAATTTTTGTTCATATTCCTAAAATATTAATCTTGGATGAAGCAACTTCCTC
CATTGATACACGAACAGAAATCTTGGTCCAAGAAGCATTTGAAAAGCTTATGAAAGGACGGACCAGCTTCATTATTGCAC
ATAGATTGTCAACTATTCAAAGCGCAGACCTTATCTTAGTTATGGTAGATGGCAATATTGTTGAACAAGGAAATCATAAA
GACTTGATGCAGAAAAAAGGTGTCTATTATCAAATGCAGACAGCACAGGATAGCCTTGAAAGCTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(358-506)

ABC transporter transmembrane region (ABC_membrane)

(24-294)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

38.055

100

0.384