Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   FSA40_RS04255 Genome accession   NZ_CP044493
Coordinates   834421..836157 (+) Length   578 a.a.
NCBI ID   WP_151416270.1    Uniprot ID   -
Organism   Streptococcus mutans strain MD     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 829421..841157
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FSA40_RS04240 (FSA40_0836) dapB 830125..830892 (+) 768 WP_002262893.1 4-hydroxy-tetrahydrodipicolinate reductase -
  FSA40_RS04245 (FSA40_0837) - 830889..832094 (+) 1206 WP_002266717.1 CCA tRNA nucleotidyltransferase -
  FSA40_RS04250 (FSA40_0838) - 832097..833965 (+) 1869 WP_106006756.1 ABC-F family ATP-binding cassette domain-containing protein -
  FSA40_RS04255 (FSA40_0839) rcrP 834421..836157 (+) 1737 WP_151416270.1 ABC transporter ATP-binding protein Regulator
  FSA40_RS04260 (FSA40_0840) rcrQ 836168..837940 (+) 1773 WP_151416271.1 ABC transporter ATP-binding protein Regulator
  FSA40_RS04265 (FSA40_0841) - 838056..838975 (+) 920 Protein_781 AEC family transporter -

Sequence

Protein


Download         Length: 578 a.a.        Molecular weight: 65109.98 Da        Isoelectric Point: 9.4876

>NTDB_id=342899 FSA40_RS04255 WP_151416270.1 834421..836157(+) (rcrP) [Streptococcus mutans strain MD]
MTYIWSYLKKYPKWLLLDILGALLFVVVNLGLPTALARMIDQGITPADKQALYFWAFIMFIIVLLGIVGRITLAYASGRL
TTTMIRDIRNDMYDKLQEYSHHEYKKIGVSSLVTRMTSDAFVLMQFAEMSLRMGIVTPLMMVSSVIMVLVTSPSLAWIVV
FAIPFLILVIYYVAAKTRPLSEKQQNTLDKINQYVRENLTGLRVIRAFARENFQEERFDLKNRSYEKTSNRLFKLTGLTE
ALFVQIIIIMIVAIVWFSLDLLKQGTIKIGDLVAFIEYSFHALFSFLIFANIFTMYPRMAVSSKRIQEVMAMPISIDPNI
NGIKETKSKGYLEFDNVTFAYPGETESPVLHDISFKAKPGETIAFIGSTGSGKSSLVNLIPRFYDVTLGRILVDGVDVRD
YNLKALRQKIGFIPQKALLFTGTIGENLKYGKKDASLAELHSAADIAQAKEFIESRAEKFDSHLAEGGSNLSGGQKQRLS
IARAVVKKPDIYIFDDSFSALDYKTDSLLRQRLKEVTGNSTVLIVAQRVGTIMNADQIIVLDEGEIVGRGSHDELMKSNA
IYREIANSQLNQQSLTQE

Nucleotide


Download         Length: 1737 bp        

>NTDB_id=342899 FSA40_RS04255 WP_151416270.1 834421..836157(+) (rcrP) [Streptococcus mutans strain MD]
ATGACATATATTTGGTCTTATTTAAAAAAATATCCCAAATGGTTACTATTGGACATTCTTGGTGCCCTTTTATTTGTTGT
TGTCAATTTGGGTTTACCGACAGCTCTGGCACGAATGATTGATCAAGGGATCACACCGGCTGATAAACAAGCTCTTTATT
TTTGGGCTTTTATTATGTTTATCATTGTTCTTTTAGGAATAGTCGGGCGTATTACCCTAGCCTATGCTTCTGGCAGATTA
ACCACGACCATGATTCGCGATATACGCAATGATATGTATGATAAATTGCAAGAGTACTCCCATCATGAATATAAGAAAAT
TGGTGTCTCTTCCTTGGTTACACGTATGACCAGTGACGCCTTTGTACTTATGCAATTTGCAGAAATGTCCTTGCGGATGG
GAATTGTTACCCCCTTGATGATGGTCTCAAGTGTTATTATGGTTTTGGTGACTAGCCCATCTTTGGCTTGGATTGTAGTA
TTTGCTATTCCTTTTTTGATACTGGTGATTTATTATGTTGCTGCAAAAACACGCCCTTTGTCTGAAAAGCAGCAAAATAC
GCTTGACAAGATTAATCAGTACGTTCGTGAAAACTTAACGGGTCTACGTGTTATTCGTGCCTTTGCGCGTGAAAATTTTC
AAGAAGAACGCTTTGACTTAAAAAACAGAAGTTATGAAAAGACTTCTAACAGACTATTTAAATTAACCGGACTCACAGAA
GCCCTGTTTGTTCAGATTATTATTATCATGATAGTAGCTATTGTCTGGTTTTCATTAGATCTGCTTAAGCAAGGGACTAT
TAAGATTGGTGATCTGGTTGCTTTTATTGAGTATAGTTTTCATGCTCTCTTTTCTTTTTTAATATTTGCTAATATTTTCA
CTATGTATCCGCGAATGGCTGTATCTAGCAAACGTATCCAAGAGGTAATGGCTATGCCTATTTCCATTGATCCCAATATA
AATGGCATTAAGGAGACTAAATCCAAAGGCTATTTGGAATTTGACAATGTGACCTTTGCCTATCCCGGTGAGACCGAAAG
TCCTGTCTTGCATGATATTTCTTTTAAAGCTAAACCGGGAGAAACGATTGCTTTTATTGGCAGTACAGGTTCAGGAAAGT
CGTCGCTTGTTAATTTGATTCCCCGTTTTTATGATGTAACTTTGGGTCGGATTCTGGTTGATGGTGTGGATGTCCGTGAC
TATAATCTTAAGGCTCTGCGTCAGAAAATTGGTTTTATTCCGCAAAAAGCGCTGCTATTTACTGGAACCATTGGAGAAAA
TCTTAAGTATGGGAAAAAGGATGCTAGTCTGGCTGAACTGCATTCAGCTGCTGATATTGCACAAGCTAAAGAATTCATCG
AAAGTCGAGCTGAGAAATTTGATAGCCACTTAGCAGAAGGCGGCAGCAATCTTTCAGGGGGACAGAAGCAGCGCTTGTCT
ATTGCGCGTGCAGTTGTTAAGAAACCAGATATCTATATTTTTGATGATTCCTTTTCAGCCTTAGATTATAAGACGGATAG
TCTCCTGCGTCAGCGTTTGAAAGAAGTGACAGGCAATTCAACAGTGCTCATTGTAGCCCAACGTGTCGGAACTATTATGA
ATGCTGACCAGATTATTGTACTGGATGAAGGAGAAATTGTTGGTCGCGGCAGCCATGATGAACTCATGAAGTCCAATGCC
ATTTATCGTGAAATTGCCAACTCACAGCTCAATCAGCAAAGTTTAACGCAAGAGTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(350-497)

ABC transporter transmembrane region (ABC_membrane)

(17-280)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

39.201

95.329

0.374

Multiple sequence alignment