Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   F7V86_RS11300 Genome accession   NZ_CP044444
Coordinates   2181665..2183482 (+) Length   605 a.a.
NCBI ID   WP_063637097.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain KC41     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2176665..2188482
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F7V86_RS11285 - 2177449..2178210 (+) 762 WP_151140208.1 MurR/RpiR family transcriptional regulator -
  F7V86_RS11290 - 2178227..2179813 (+) 1587 WP_063637096.1 alpha-glucoside-specific PTS transporter subunit IIBC -
  F7V86_RS11295 - 2179951..2181684 (+) 1734 WP_061861274.1 ABC transporter ATP-binding protein -
  F7V86_RS11300 rcrQ 2181665..2183482 (+) 1818 WP_063637097.1 ABC transporter ATP-binding protein Regulator
  F7V86_RS11305 - 2183650..2184054 (+) 405 WP_012117101.1 DoxX family protein -
  F7V86_RS11310 - 2184071..2184928 (+) 858 WP_017419137.1 VOC family protein -
  F7V86_RS11320 cyoE 2185288..2186235 (+) 948 WP_017419138.1 heme o synthase -
  F7V86_RS11325 - 2186273..2186824 (-) 552 WP_012117104.1 PadR family transcriptional regulator -
  F7V86_RS11330 - 2187020..2187622 (+) 603 WP_007408540.1 NAD(P)H-dependent oxidoreductase -

Sequence

Protein


Download         Length: 605 a.a.        Molecular weight: 67456.25 Da        Isoelectric Point: 9.5434

>NTDB_id=342666 F7V86_RS11300 WP_063637097.1 2181665..2183482(+) (rcrQ) [Bacillus amyloliquefaciens strain KC41]
MQKDIRKPFRYPKIPLKSNEGGRKRAKAKDTKGTLRRIWSYVAEKKGLLTLVIIMVVISAIFGLLGPFVIGKAIDHFIVG
QTTDGLAGVLFMLFVIYLVQSLSLWFQNYWMINISQSTVFKMRSELFTHLHELPIPFFDKQRLGDLMSRVTNDIENVSST
LNTSVIQVLSSVITFVGTIAVMLYMSPLLTLITLLIIPIMLLSIKWITNRTGLLFKQQQKNLGELNGFIEESISGAKVIK
AYSREDRVMEQFLEKNAALQSSGFWAQTISGFIPKVMNSLNNLSFTIIAAVGGLFALKGLISIGAIVVFAEYSRQFTRPL
NDLANQFNTMLSAIAGAERVFDVLDEKEEREDEEHALYQPIKTGEIEFRDVSFGYQEDSLILKHLSFSVPKGQSIAFVGP
TGAGKTTVTSLIARFYEPNNGKILIDGTDIKKLTRSSLRKNMGFVLQDSFLFQGTIRENIRYGRLDASDQEVEAAAKAAN
AHGFIERLPKGYDTVLTQNGAGISQGQKQLISIARAVLADPVLLILDEATSNIDTVTEVKIQEALGRLMAGRTSVIIAHR
LNTIQKADQILVLKDGEMAEKGTHAELLSQNGFYRELYESQFRES

Nucleotide


Download         Length: 1818 bp        

>NTDB_id=342666 F7V86_RS11300 WP_063637097.1 2181665..2183482(+) (rcrQ) [Bacillus amyloliquefaciens strain KC41]
ATGCAAAAAGACATTCGTAAACCTTTCCGATATCCGAAAATACCGCTCAAATCAAATGAAGGCGGCAGAAAACGCGCGAA
AGCAAAAGATACAAAAGGCACGCTGCGCAGAATCTGGTCTTATGTAGCCGAGAAAAAAGGGCTTTTAACCCTTGTGATCA
TCATGGTAGTCATAAGCGCCATATTCGGCCTGCTCGGACCGTTCGTCATCGGGAAAGCGATTGATCATTTTATCGTCGGA
CAGACGACAGACGGATTGGCGGGGGTGCTGTTCATGCTGTTTGTGATTTACCTCGTGCAATCATTGTCCTTATGGTTTCA
AAACTATTGGATGATCAATATCTCGCAAAGCACCGTGTTTAAAATGCGGAGCGAGCTGTTTACCCATCTGCATGAGCTGC
CGATTCCGTTTTTTGATAAACAGCGGCTCGGGGACTTAATGAGCCGGGTCACCAATGATATCGAAAATGTCAGCTCCACT
TTAAATACATCCGTCATTCAAGTGCTGTCGAGCGTCATTACATTCGTCGGCACAATCGCCGTCATGCTGTACATGAGTCC
GCTTTTAACATTGATCACGCTTTTGATTATTCCGATCATGCTTTTGAGCATTAAATGGATCACCAACCGGACGGGACTGC
TGTTTAAACAGCAGCAGAAAAACCTCGGCGAGCTGAACGGTTTTATTGAAGAGTCGATATCAGGGGCGAAGGTCATTAAA
GCCTATTCGAGGGAAGACCGCGTCATGGAACAATTTTTAGAAAAAAACGCGGCGTTACAATCATCGGGGTTTTGGGCGCA
GACAATTTCGGGATTCATTCCGAAAGTCATGAACTCTTTAAACAATTTAAGCTTTACGATTATAGCGGCGGTCGGCGGGC
TGTTTGCGCTGAAGGGATTGATCTCGATCGGTGCCATCGTCGTATTCGCCGAATACTCGCGGCAGTTCACGCGCCCTTTA
AATGATTTAGCCAATCAGTTCAATACGATGTTATCGGCCATCGCCGGGGCTGAACGGGTGTTTGACGTGCTGGATGAAAA
AGAGGAGCGGGAAGATGAAGAGCATGCGCTGTACCAGCCGATCAAAACGGGAGAAATTGAATTCCGAGATGTCTCCTTCG
GCTATCAGGAAGACAGCTTGATCTTAAAACACCTGTCCTTCAGCGTTCCGAAAGGACAGTCAATCGCCTTCGTCGGACCG
ACCGGAGCGGGTAAAACAACCGTTACGAGCCTGATCGCCCGTTTTTACGAGCCGAATAACGGAAAAATCCTCATTGACGG
AACGGACATCAAAAAACTGACGAGATCCAGTCTGAGAAAAAACATGGGGTTTGTCCTGCAGGATTCCTTTCTCTTTCAGG
GCACCATCAGGGAAAATATCCGTTACGGCCGTCTGGACGCATCTGATCAAGAGGTGGAGGCAGCCGCAAAAGCCGCCAAT
GCCCACGGATTCATCGAACGGCTCCCGAAAGGCTACGATACCGTCCTTACCCAAAACGGCGCGGGCATCAGCCAAGGACA
AAAACAGCTTATTTCCATCGCGAGAGCTGTGCTGGCGGACCCGGTGCTGCTCATTTTGGATGAAGCGACGAGCAACATTG
ATACGGTGACGGAAGTGAAAATACAAGAAGCGCTCGGCCGTTTAATGGCGGGCAGAACAAGCGTCATCATCGCTCACAGG
CTGAACACGATTCAAAAAGCCGATCAGATTCTTGTACTGAAAGACGGCGAAATGGCTGAAAAAGGAACTCATGCCGAACT
TCTCAGCCAGAACGGGTTTTACCGGGAATTATATGAAAGCCAGTTCCGGGAATCATAG

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(49-320)

ABC transporter (ABC_tran)

(382-531)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

38.593

96.364

0.372