Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   SALIVB_RS09065 Genome accession   NC_015760
Coordinates   1980679..1983027 (+) Length   782 a.a.
NCBI ID   WP_041817281.1    Uniprot ID   -
Organism   Streptococcus salivarius CCHSS3     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1975679..1988027
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SALIVB_RS09055 (SALIVB_1895) - 1977712..1979730 (-) 2019 WP_013991193.1 FtsX-like permease family protein -
  SALIVB_RS09060 (SALIVB_1896) - 1979740..1980474 (-) 735 WP_002889290.1 ABC transporter ATP-binding protein -
  SALIVB_RS09065 (SALIVB_1897) mutS/mutS2 1980679..1983027 (+) 2349 WP_041817281.1 endonuclease MutS2 Machinery gene
  SALIVB_RS09070 (SALIVB_1898) - 1983130..1983672 (-) 543 WP_013991195.1 CvpA family protein -
  SALIVB_RS09075 (SALIVB_1899) zapA 1983669..1983983 (-) 315 WP_004183554.1 cell division protein ZapA -
  SALIVB_RS09080 (SALIVB_1900) rnhC 1984300..1985190 (+) 891 WP_041817282.1 ribonuclease HIII -
  SALIVB_RS09085 (SALIVB_1901) lepB 1985209..1985832 (+) 624 WP_013991198.1 signal peptidase I -

Sequence

Protein


Download         Length: 782 a.a.        Molecular weight: 87633.92 Da        Isoelectric Point: 6.5915

>NTDB_id=34244 SALIVB_RS09065 WP_041817281.1 1980679..1983027(+) (mutS/mutS2) [Streptococcus salivarius CCHSS3]
MNTKILDQLEFNKVKDQFTEYLQTEQAQAELRDLVPMTNPERIQNQFTEIQEMAEIFVEHHSFAIGSLRDISEPLRRLEL
DADLNIQELIAIKKVLQASADLGRFYADLENIELIALKRLFEKIEAFPSLQGSLQSINDGGFIEHFASPELQNIRRQLKS
CDDAIRQTLQDILKKSGHMLAESLIASRNGRSVLPVKNTYRNRIAGVVHDISSSGNTVYIEPRAVIQLNEEITQLRADER
HETARILHELSDQLRPQAAAIANNAWILGHMDFIRGKYLYLHDKKAVIPKISDNQTLQLLNVRHPLLVNPVANDLRFDED
LTAIVITGPNTGGKTVMLKTLGLAQLMAQSGLPILADKGSRVAIFQEIFADIGDEQSIEQSLSTFSSHMTHIVEILNAAD
SNSLVLVDELGAGTDPQEGASLAMAILEHLRLSQIKTMATTHYPELKAYGIETQHVENASMEFDTATLSPTYRFMQGVPG
RSNAFEIARRLGLNEIIVKEAENLTDTDSDVNRIIEQLEAQTVETQKRLEHIKDVEQENLKFNRAVKKLYNEFSHEYDKE
LEKAQKEIQEMVDTALAESDSILKNLHDKSQLKPHEVIDAKGKLKKLAPQVDLSKNKVLRKAKKEKAARAPRVGDDIIVT
AYGQRGTLTGQAKNGNWEAQVGLIKMTLKADEFTLVRAQAEAQQPKKKQINVVKKAKKTSGGPRARLDLRGKRYEEAMQE
LDAFIDQALLNNMSQVDIIHGIGTGVIRDAVTKYLRRHRHVKSFEYAPQSAGGSGCTIATLG

Nucleotide


Download         Length: 2349 bp        

>NTDB_id=34244 SALIVB_RS09065 WP_041817281.1 1980679..1983027(+) (mutS/mutS2) [Streptococcus salivarius CCHSS3]
ATGAACACAAAGATTTTAGACCAATTAGAATTTAACAAGGTCAAGGACCAGTTCACAGAATACCTGCAGACTGAACAGGC
TCAGGCGGAGTTACGTGACTTGGTGCCTATGACCAATCCAGAAAGAATTCAAAATCAATTTACAGAAATTCAAGAAATGG
CTGAGATTTTCGTAGAGCACCACAGCTTTGCCATTGGTAGCTTGCGAGATATTTCTGAGCCCTTGCGTCGCTTGGAACTA
GATGCTGACCTCAACATCCAGGAGCTCATTGCCATCAAGAAGGTGCTGCAAGCTTCTGCTGACCTTGGTCGCTTTTACGC
TGACCTTGAAAATATAGAGCTCATCGCCCTTAAACGTCTTTTCGAAAAGATTGAAGCCTTCCCAAGTCTACAAGGCAGTC
TTCAGAGTATCAATGACGGTGGTTTTATTGAGCATTTTGCTAGCCCAGAGTTGCAAAATATTCGTCGTCAACTTAAATCT
TGTGATGATGCCATTCGCCAGACCTTGCAAGACATTCTCAAGAAATCTGGTCACATGTTGGCTGAGAGTTTGATTGCTAG
TCGTAATGGTCGTTCAGTGCTTCCTGTCAAAAACACCTACCGTAACCGTATCGCAGGGGTTGTGCATGACATCTCAAGCT
CTGGAAACACAGTATATATCGAGCCACGTGCCGTTATCCAGCTCAACGAAGAAATTACACAATTACGTGCAGACGAACGC
CACGAGACGGCTCGTATCCTGCATGAACTGTCTGATCAACTGCGCCCACAAGCTGCTGCTATCGCTAACAACGCTTGGAT
TTTGGGCCACATGGACTTCATTCGAGGAAAATACCTCTATCTCCATGATAAAAAAGCGGTTATTCCAAAGATTAGTGACA
ATCAAACACTCCAACTGCTTAACGTCCGTCACCCTCTCTTGGTCAATCCAGTAGCCAACGATTTGCGCTTTGATGAGGAC
CTCACGGCCATTGTCATCACAGGTCCCAATACTGGTGGTAAAACGGTCATGCTTAAAACGCTAGGACTAGCACAACTAAT
GGCTCAATCTGGTCTTCCAATTTTGGCTGATAAGGGCAGCCGTGTCGCCATTTTCCAAGAGATCTTTGCGGACATCGGAG
ATGAACAGTCTATCGAACAGAGTTTGTCAACATTCTCTAGTCACATGACCCACATTGTTGAGATTCTGAATGCTGCCGAC
AGTAACAGTCTGGTCTTGGTCGATGAGCTTGGGGCTGGTACCGACCCTCAGGAAGGAGCTAGTCTAGCCATGGCAATCTT
AGAGCACCTCCGTTTAAGTCAGATTAAGACCATGGCTACCACTCACTATCCTGAGCTTAAGGCCTATGGGATTGAGACGC
AACATGTGGAAAATGCCAGCATGGAGTTTGACACAGCGACTTTAAGTCCTACCTATCGTTTTATGCAAGGGGTTCCTGGT
CGTTCTAATGCCTTTGAAATTGCTCGACGCCTCGGTTTGAATGAGATTATTGTCAAGGAGGCAGAAAACCTCACGGATAC
TGATAGTGATGTCAACCGTATCATCGAGCAACTTGAGGCCCAAACTGTGGAAACACAAAAACGTCTGGAACACATCAAGG
ACGTGGAGCAAGAGAACCTTAAATTCAACCGTGCGGTCAAGAAACTCTATAACGAATTCTCCCATGAATACGACAAGGAA
CTCGAAAAGGCTCAAAAAGAAATTCAAGAGATGGTTGATACCGCTTTGGCTGAGAGCGATAGTATTCTCAAAAATCTCCA
CGATAAGAGTCAACTCAAACCTCATGAAGTTATCGACGCCAAAGGAAAACTCAAGAAACTTGCCCCACAAGTGGACCTCT
CTAAGAATAAGGTCCTTCGTAAGGCTAAGAAAGAAAAGGCTGCGCGTGCCCCTCGTGTTGGAGATGATATCATCGTTACC
GCCTATGGGCAACGTGGTACCCTTACCGGTCAGGCCAAAAATGGTAACTGGGAAGCTCAGGTCGGTCTTATCAAGATGAC
CCTCAAGGCAGACGAATTCACTCTGGTTCGTGCCCAAGCTGAGGCGCAACAGCCTAAGAAAAAACAGATTAACGTAGTTA
AAAAAGCCAAGAAGACATCTGGCGGTCCTCGTGCCCGTCTAGACCTTCGTGGGAAACGTTACGAAGAAGCTATGCAAGAG
CTTGATGCCTTTATTGACCAAGCCCTACTTAATAACATGAGTCAGGTGGACATCATCCACGGTATTGGTACAGGTGTCAT
CCGTGATGCTGTTACCAAATATCTCCGCCGTCATCGCCATGTTAAAAGTTTTGAATATGCCCCACAAAGTGCTGGTGGTT
CCGGATGTACCATTGCAACCTTAGGGTAA

Domains

Predicted by InterProScan.

Smr domain (Smr)

(707-781)

MutS domain V (MutS_V)

(324-505)

MutS2 and Smr-associated SH3 domain (MSSS)

(633-672)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

39.344

100

0.399