Detailed information NTG0034212

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: SALIVB_RS05580
• Genome accession: NC_015760
• Coordinates: 1251987..1252868 (-)
• Length: 293 a.a.
• NCBI ID: WP_013990683.1
• Uniprot ID: -
• Organism: Streptococcus salivarius CCHSS3
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1246987..1257868

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SALIVB_RS05555 (SALIVB_1147)	yycF	1247928..1248635 (-)	708	WP_002884978.1	response regulator YycF	-
SALIVB_RS05560 (SALIVB_1148)	-	1248920..1249687 (+)	768	WP_002885036.1	amino acid ABC transporter ATP-binding protein	-
SALIVB_RS05565 (SALIVB_1149)	-	1249697..1250530 (+)	834	WP_013990682.1	transporter substrate-binding domain-containing protein	-
SALIVB_RS05570 (SALIVB_1150)	-	1250548..1251246 (+)	699	WP_002886251.1	amino acid ABC transporter permease	-
SALIVB_RS05575 (SALIVB_1151)	-	1251258..1251908 (+)	651	WP_002886253.1	amino acid ABC transporter permease	-
SALIVB_RS05580 (SALIVB_1152)	endA	1251987..1252868 (-)	882	WP_013990683.1	DNA/RNA non-specific endonuclease	Machinery gene
SALIVB_RS05585 (SALIVB_1153)	-	1252930..1253118 (-)	189	WP_013990684.1	DNA-directed RNA polymerase subunit beta	-
SALIVB_RS05590 (SALIVB_1154)	murA	1253120..1254391 (-)	1272	WP_013990685.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
SALIVB_RS05595 (SALIVB_1155)	-	1254459..1254695 (-)	237	WP_013990686.1	DUF1146 family protein	-
SALIVB_RS05600 (SALIVB_1156)	-	1255017..1256120 (-)	1104	WP_013990687.1	glycosyl hydrolase family 8	-
SALIVB_RS05605 (SALIVB_1157)	-	1256129..1257439 (-)	1311	WP_014633211.1	glycosyltransferase family 2 protein	-

Sequence

Protein

• Length: 293 a.a.
• Molecular weight: 31476.06 Da
• Isoelectric Point: 10.2177

>NTDB_id=34212 SALIVB_RS05580 WP_013990683.1 1251987..1252868(-) (endA) [Streptococcus salivarius CCHSS3]
MAKRKTSLTNKQKRQLVSLLIAVLIAVLGYIGTSNKLSPNNPIKQVASLVSGKSNNSAKSNGSTSGQSTPQEQLAETVMT
SSVKSQLGNAIEWNGAGAYIVNGNKTNLNAKVSSQPYANNQVKTVQGQTVPTVANALLSKATRQYKNRQETGNGSTSWTP
AGWHQVHNLSGEYSHAVDRGHLLGYALVGGLKGFDASTSNPENIAVQTAWANQANSETSTGQNYYESLVRKAQDKNKRVR
YRVTLIYEGDNLIPSGSHLEAKSADGSLEFNVFVPNVQQGITLDYYSGKVTVN

Nucleotide

• Length: 882 bp

>NTDB_id=34212 SALIVB_RS05580 WP_013990683.1 1251987..1252868(-) (endA) [Streptococcus salivarius CCHSS3]
ATGGCAAAAAGAAAGACATCTTTAACAAATAAACAGAAACGTCAACTAGTCTCGTTACTAATAGCGGTCTTGATTGCAGT
GTTAGGTTACATTGGAACGAGCAATAAGCTCTCACCTAACAATCCAATCAAGCAGGTAGCTAGTCTAGTCTCGGGAAAAT
CCAATAACTCCGCCAAATCAAACGGCTCAACAAGTGGGCAGTCTACGCCACAAGAGCAGCTCGCTGAGACGGTGATGACG
AGCTCCGTCAAGAGTCAACTAGGAAACGCCATAGAATGGAATGGTGCTGGTGCCTATATTGTTAACGGTAATAAGACCAA
TCTTAATGCTAAGGTATCTAGTCAACCCTATGCAAATAACCAAGTCAAAACAGTTCAAGGACAAACGGTTCCTACAGTAG
CTAATGCCTTGTTAAGTAAAGCGACCAGACAGTACAAAAATCGTCAAGAAACGGGGAATGGCTCAACTTCTTGGACACCA
GCTGGATGGCATCAAGTTCACAATCTTTCAGGAGAGTATAGTCATGCCGTAGACCGAGGTCATTTGTTAGGTTATGCTCT
AGTAGGTGGTCTCAAAGGATTTGATGCCTCAACTTCAAATCCAGAGAATATTGCTGTTCAAACTGCTTGGGCTAACCAAG
CTAATAGCGAAACTTCCACAGGCCAAAATTATTATGAAAGCCTGGTACGAAAAGCTCAGGATAAAAACAAACGTGTCCGT
TATCGCGTTACCCTCATTTATGAAGGAGATAACCTGATTCCATCAGGATCACATCTTGAAGCCAAGTCAGCAGATGGCTC
GCTTGAGTTCAACGTCTTCGTTCCAAATGTACAACAGGGAATTACCCTAGATTATTATTCAGGTAAAGTAACGGTGAATT
AA

Domains

Predicted by InterProScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (99-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Streptococcus pneumoniae Rx1	70.356	86.348	0.608
endA	Streptococcus pneumoniae D39	70.356	86.348	0.608
endA	Streptococcus pneumoniae R6	70.356	86.348	0.608
endA	Streptococcus pneumoniae TIGR4	70.356	86.348	0.608