Detailed information NTG0342063

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: ETT52_RS01425
• Genome accession: NZ_CP035447
• Coordinates: 261659..262582 (+)
• Length: 307 a.a.
• NCBI ID: WP_109828499.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes strain emm97.1
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 256659..267582

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ETT52_RS01410 (ETT52_01410)	amiC	258159..259661 (+)	1503	WP_136026406.1	ABC transporter permease	Regulator
ETT52_RS01415 (ETT52_01415)	amiD	259661..260587 (+)	927	WP_002986004.1	oligopeptide ABC transporter permease OppC	Regulator
ETT52_RS01420 (ETT52_01420)	amiE	260596..261666 (+)	1071	WP_010921893.1	ABC transporter ATP-binding protein	Regulator
ETT52_RS01425 (ETT52_01425)	amiF	261659..262582 (+)	924	WP_109828499.1	ABC transporter ATP-binding protein	Regulator
ETT52_RS09450 (ETT52_01430)	-	262620..262709 (-)	90	WP_077707078.1	IS3 family transposase	-
ETT52_RS09260 (ETT52_01435)	-	262752..262970 (-)	219	WP_227874859.1	transposase	-

Sequence

Protein

• Length: 307 a.a.
• Molecular weight: 34729.93 Da
• Isoelectric Point: 6.5113

>NTDB_id=342063 ETT52_RS01425 WP_109828499.1 261659..262582(+) (amiF) [Streptococcus pyogenes strain emm97.1]
MSEKLVEVKDLEISFGEGKKKFVAVKNANFFIKKGETFSLVGESGSGKTTIGRAIIGLNDTSSGQILYDGKVINGRKSKS
EANELIRKIQMIFQDPAASLNERATVDYIISEGLYNFNLFKTEEERKEKIKNMMAEVGLLSEHLTRYPHEFSGGQRQRIG
IARALVMNPEFVIADEPISALDVSVRAQVLNLLKRMQAEKGLTYLFIAHDLSVVRFISDRIAVIHKGVIVEVAETEELFN
NPIHPYTQSLLSAVPIPDPILERQKELIVYHPDQHDYTLDKPSMVEIKPNHFVWANQAEIEKYQKEL

Nucleotide

• Length: 924 bp

>NTDB_id=342063 ETT52_RS01425 WP_109828499.1 261659..262582(+) (amiF) [Streptococcus pyogenes strain emm97.1]
ATGTCTGAGAAATTAGTCGAAGTAAAAGACCTAGAAATTTCCTTCGGAGAAGGAAAGAAAAAATTTGTTGCAGTTAAAAA
TGCTAATTTCTTTATTAAAAAAGGAGAAACCTTTTCTTTAGTTGGAGAGTCTGGGAGTGGTAAAACAACAATTGGTCGTG
CTATTATTGGTTTGAACGATACTAGTTCAGGTCAAATTTTATACGATGGGAAAGTAATTAATGGCAGAAAATCAAAATCA
GAAGCCAATGAGCTCATTCGTAAAATTCAAATGATTTTCCAAGATCCCGCTGCTAGTTTGAATGAACGGGCAACCGTTGA
CTACATCATTTCAGAAGGTCTTTATAACTTTAATCTGTTTAAAACAGAGGAAGAACGTAAAGAAAAAATTAAGAACATGA
TGGCCGAAGTTGGTTTGCTATCAGAGCATTTGACGCGCTACCCTCATGAATTTTCAGGAGGTCAACGTCAGCGGATCGGT
ATCGCTAGAGCCCTAGTAATGAACCCTGAATTCGTTATTGCTGATGAACCGATTTCAGCTTTGGACGTTTCCGTTCGCGC
ACAGGTCTTGAATCTTCTTAAAAGAATGCAAGCCGAAAAAGGTTTGACTTATCTCTTCATTGCCCATGATCTTTCAGTCG
TTCGCTTTATTTCAGATCGTATTGCGGTTATCCATAAAGGGGTTATTGTAGAAGTTGCAGAAACAGAAGAACTGTTTAAT
AACCCAATTCATCCCTACACCCAATCTTTGTTATCAGCCGTGCCTATCCCAGATCCAATTTTAGAGCGTCAAAAAGAACT
TATTGTCTATCATCCAGACCAGCATGATTATACATTAGATAAGCCATCAATGGTTGAAATCAAACCAAATCACTTTGTTT
GGGCAAACCAAGCAGAAATTGAAAAATATCAAAAAGAATTGTAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (25-178)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (230-262)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMG 18311	82.353	99.674	0.821
amiF	Streptococcus thermophilus LMD-9	82.026	99.674	0.818
amiF	Streptococcus salivarius strain HSISS4	82.026	99.674	0.818