Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | ETT56_RS00695 | Genome accession | NZ_CP035443 |
| Coordinates | 105789..106742 (+) | Length | 317 a.a. |
| NCBI ID | WP_063633001.1 | Uniprot ID | - |
| Organism | Streptococcus pyogenes strain emm58 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 100789..111742
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ETT56_RS00655 (ETT56_00655) | - | 101616..101981 (+) | 366 | WP_002986560.1 | DUF1033 family protein | - |
| ETT56_RS00660 (ETT56_00660) | comYA | 102074..103012 (+) | 939 | WP_023079010.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| ETT56_RS00665 (ETT56_00665) | comYB | 102948..103982 (+) | 1035 | WP_230373357.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| ETT56_RS00670 (ETT56_00670) | comYC | 103984..104310 (+) | 327 | WP_002986552.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| ETT56_RS00675 (ETT56_00675) | comGD | 104285..104713 (+) | 429 | WP_002986548.1 | competence type IV pilus minor pilin ComGD | - |
| ETT56_RS00680 (ETT56_00680) | comGE | 104670..104954 (+) | 285 | WP_032465969.1 | competence type IV pilus minor pilin ComGE | - |
| ETT56_RS00685 (ETT56_00685) | comYF | 104947..105381 (+) | 435 | WP_002992738.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| ETT56_RS00690 (ETT56_00690) | comGG | 105365..105691 (+) | 327 | WP_010921801.1 | competence type IV pilus minor pilin ComGG | - |
| ETT56_RS00695 (ETT56_00695) | comYH | 105789..106742 (+) | 954 | WP_063633001.1 | class I SAM-dependent methyltransferase | Machinery gene |
| ETT56_RS00700 (ETT56_00700) | - | 106801..107997 (+) | 1197 | WP_010921803.1 | acetate kinase | - |
| ETT56_RS00705 (ETT56_00705) | - | 108184..108492 (+) | 309 | Protein_89 | hypothetical protein | - |
| ETT56_RS00710 (ETT56_00710) | proC | 108575..109345 (-) | 771 | WP_023610882.1 | pyrroline-5-carboxylate reductase | - |
| ETT56_RS00715 (ETT56_00715) | pepA | 109393..110460 (-) | 1068 | WP_023610877.1 | glutamyl aminopeptidase | - |
| ETT56_RS00725 (ETT56_00725) | - | 110925..111209 (+) | 285 | WP_002992749.1 | DUF4651 domain-containing protein | - |
| ETT56_RS00730 (ETT56_00730) | - | 111206..111523 (+) | 318 | WP_002992751.1 | thioredoxin family protein | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 36028.19 Da Isoelectric Point: 4.8673
>NTDB_id=341840 ETT56_RS00695 WP_063633001.1 105789..106742(+) (comYH) [Streptococcus pyogenes strain emm58]
MTFEKIEEAYQLLLENCQLIENDLKTHIYDAIVEQNSFYLGAEGASPQVAQNSDKLKALCLTKEEWRKAYQFLFIKAAQT
EQLQANHQFTPDAIGFILLYLLEQLSDKDSLEVLEIGSGTGNLAQTLLNNTSKSLDYIGIELDDLLIDLSASIAKIMDSS
AHFIQEDAVRPQLLKESDIVISDLPVGYYPNDDIAKRYKVASSDKHTYAHHLLMEQSLKYLKKDGFAIFLAPVNLLTSPQ
SQLLKQWLKDYAQVVTLITLPDSIFGHPSNAKSIIVLQKQTDHPMETFVYPIRDLKLAENIHDFMENFKKWKLSNVN
MTFEKIEEAYQLLLENCQLIENDLKTHIYDAIVEQNSFYLGAEGASPQVAQNSDKLKALCLTKEEWRKAYQFLFIKAAQT
EQLQANHQFTPDAIGFILLYLLEQLSDKDSLEVLEIGSGTGNLAQTLLNNTSKSLDYIGIELDDLLIDLSASIAKIMDSS
AHFIQEDAVRPQLLKESDIVISDLPVGYYPNDDIAKRYKVASSDKHTYAHHLLMEQSLKYLKKDGFAIFLAPVNLLTSPQ
SQLLKQWLKDYAQVVTLITLPDSIFGHPSNAKSIIVLQKQTDHPMETFVYPIRDLKLAENIHDFMENFKKWKLSNVN
Nucleotide
Download Length: 954 bp
>NTDB_id=341840 ETT56_RS00695 WP_063633001.1 105789..106742(+) (comYH) [Streptococcus pyogenes strain emm58]
ATGACTTTTGAAAAAATTGAAGAAGCTTATCAGCTGCTCTTAGAGAACTGTCAACTAATTGAAAATGATCTAAAAACACA
TATATACGATGCCATTGTTGAACAAAACTCCTTTTATTTAGGGGCTGAGGGAGCTAGTCCTCAAGTTGCTCAAAATAGTG
ATAAACTGAAAGCCTTGTGCCTGACAAAAGAAGAATGGCGTAAGGCCTACCAGTTTCTTTTTATTAAGGCAGCTCAGACT
GAGCAACTCCAAGCCAACCATCAGTTCACACCAGATGCTATTGGCTTCATTCTGCTGTATCTTTTGGAACAATTGAGTGA
TAAAGATAGCTTAGAGGTACTTGAGATTGGAAGTGGAACAGGGAACCTAGCCCAAACCCTTCTCAACAACACGAGCAAGA
GCCTTGATTATATAGGGATTGAACTTGATGATCTCTTGATTGATCTGTCAGCCAGTATTGCTAAGATAATGGATTCTTCA
GCTCATTTTATTCAAGAAGATGCGGTAAGGCCTCAATTACTAAAAGAAAGTGACATTGTCATCAGTGACTTACCAGTTGG
TTATTATCCTAACGATGATATTGCCAAACGGTACAAGGTGGCTAGTTCAGATAAGCATACCTATGCCCATCATTTATTAA
TGGAACAGTCTTTAAAATACTTGAAAAAAGACGGTTTTGCGATTTTTCTGGCACCAGTCAATTTATTGACGAGCCCTCAG
AGCCAGTTATTGAAACAGTGGTTAAAAGATTATGCTCAGGTGGTGACCTTGATTACGCTACCAGATTCTATTTTTGGTCA
TCCCTCAAATGCCAAGTCCATTATTGTCTTACAAAAACAAACAGACCACCCAATGGAAACCTTTGTCTATCCAATTCGGG
ATTTGAAGCTTGCAGAGAATATTCATGATTTTATGGAAAATTTCAAAAAATGGAAACTGAGTAATGTCAATTAA
ATGACTTTTGAAAAAATTGAAGAAGCTTATCAGCTGCTCTTAGAGAACTGTCAACTAATTGAAAATGATCTAAAAACACA
TATATACGATGCCATTGTTGAACAAAACTCCTTTTATTTAGGGGCTGAGGGAGCTAGTCCTCAAGTTGCTCAAAATAGTG
ATAAACTGAAAGCCTTGTGCCTGACAAAAGAAGAATGGCGTAAGGCCTACCAGTTTCTTTTTATTAAGGCAGCTCAGACT
GAGCAACTCCAAGCCAACCATCAGTTCACACCAGATGCTATTGGCTTCATTCTGCTGTATCTTTTGGAACAATTGAGTGA
TAAAGATAGCTTAGAGGTACTTGAGATTGGAAGTGGAACAGGGAACCTAGCCCAAACCCTTCTCAACAACACGAGCAAGA
GCCTTGATTATATAGGGATTGAACTTGATGATCTCTTGATTGATCTGTCAGCCAGTATTGCTAAGATAATGGATTCTTCA
GCTCATTTTATTCAAGAAGATGCGGTAAGGCCTCAATTACTAAAAGAAAGTGACATTGTCATCAGTGACTTACCAGTTGG
TTATTATCCTAACGATGATATTGCCAAACGGTACAAGGTGGCTAGTTCAGATAAGCATACCTATGCCCATCATTTATTAA
TGGAACAGTCTTTAAAATACTTGAAAAAAGACGGTTTTGCGATTTTTCTGGCACCAGTCAATTTATTGACGAGCCCTCAG
AGCCAGTTATTGAAACAGTGGTTAAAAGATTATGCTCAGGTGGTGACCTTGATTACGCTACCAGATTCTATTTTTGGTCA
TCCCTCAAATGCCAAGTCCATTATTGTCTTACAAAAACAAACAGACCACCCAATGGAAACCTTTGTCTATCCAATTCGGG
ATTTGAAGCTTGCAGAGAATATTCATGATTTTATGGAAAATTTCAAAAAATGGAAACTGAGTAATGTCAATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
65.823 |
99.685 |
0.656 |
| comYH | Streptococcus mutans UA159 |
65.823 |
99.685 |
0.656 |