Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   F5989_RS01455 Genome accession   NZ_CP044221
Coordinates   290071..291816 (+) Length   581 a.a.
NCBI ID   WP_002270002.1    Uniprot ID   -
Organism   Streptococcus mutans strain NCH105     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 285071..296816
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F5989_RS01435 (F5989_01465) glyA 285479..286741 (+) 1263 WP_002282524.1 serine hydroxymethyltransferase -
  F5989_RS01440 (F5989_01470) - 286738..287715 (+) 978 WP_002264268.1 nucleoid-associated protein -
  F5989_RS01445 (F5989_01475) - 287717..288331 (+) 615 WP_002286819.1 lysozyme family protein -
  F5989_RS01450 (F5989_01480) - 288341..290074 (+) 1734 WP_156294862.1 ABC transporter ATP-binding protein -
  F5989_RS01455 (F5989_01485) rcrQ 290071..291816 (+) 1746 WP_002270002.1 ABC transporter ATP-binding protein Regulator
  F5989_RS01460 (F5989_01490) - 291947..293662 (-) 1716 WP_002264266.1 phospho-sugar mutase -
  F5989_RS01465 (F5989_01495) - 293757..294329 (-) 573 WP_002262264.1 ECF transporter S component -
  F5989_RS01470 (F5989_01500) coaC 294404..294943 (-) 540 WP_002289591.1 phosphopantothenoylcysteine decarboxylase -
  F5989_RS01475 (F5989_01505) - 294936..295622 (-) 687 WP_002273952.1 phosphopantothenate--cysteine ligase -

Sequence

Protein


Download         Length: 581 a.a.        Molecular weight: 65283.99 Da        Isoelectric Point: 9.5819

>NTDB_id=341565 F5989_RS01455 WP_002270002.1 290071..291816(+) (rcrQ) [Streptococcus mutans strain NCH105]
MKARNNKNTLKRLNADFLKQRILVFLALLGTLIQVSLTVYLPVLIGRAVDAVLAKNVQKILPTILISMILVVAFNTIIQW
INPLIYNRLVFTYSQKLRQNIIEKLYRLPLSYLDKHSSGDLVSRITTDVEQLSNGLLMVFNQFFVGILTILLTIITMAKL
DFFMMVLVLALTPLSLFVARFIAQKSYHLYQRQTRARGAFTQHIEESLRQESLIQSFNAQDQFIHTFDHLNSKYAKYSQG
AIFYSSTVNPATRFINALIYALLAGIGALRIMNGNFTVGQLTTFLNYVTQYTKPFNDISAVLSELQSALACAERLYMILD
EKDAKDDGKKELVSESVKGAIAFDKISFGYDEKQTLIKNLSVNIPQGSKVAIVGPTGAGKSTLINLLMRFYDLREGQILL
DGQAITDYSKASYRQQIGMVLQETWLKTATVLENIAFGYPEASREQVIAAAKAANADFFIKQLPQGYDTFLADAGESLSQ
GQRQLLTIARIFVHIPKILILDEATSSIDTRTEILVQEAFEKLMKGRTSFIIAHRLSTIQSADLILVMVDGNIVEQGNHK
DLMQKKGVYYQMQTAQDSLES

Nucleotide


Download         Length: 1746 bp        

>NTDB_id=341565 F5989_RS01455 WP_002270002.1 290071..291816(+) (rcrQ) [Streptococcus mutans strain NCH105]
ATGAAAGCTAGAAATAATAAAAATACCTTAAAGCGCTTGAATGCTGACTTTCTTAAGCAGAGAATTTTGGTTTTTCTTGC
CTTATTGGGTACTTTGATTCAGGTCAGCCTAACGGTTTATCTCCCAGTTCTAATTGGGCGAGCAGTTGATGCTGTTCTTG
CTAAAAATGTCCAGAAAATCTTACCGACAATCTTGATTAGCATGATTCTTGTTGTTGCCTTTAATACCATTATCCAATGG
ATCAATCCCTTGATTTACAATCGTTTGGTTTTCACTTATAGCCAGAAGCTTCGGCAGAATATCATTGAAAAACTTTATCG
CCTCCCTTTATCTTATTTGGATAAGCATTCTTCAGGTGATTTAGTCAGTCGTATAACAACGGATGTTGAACAATTATCCA
ACGGACTTTTAATGGTTTTTAATCAGTTTTTCGTAGGTATTTTAACTATTTTGTTAACCATCATAACAATGGCGAAGTTA
GACTTTTTTATGATGGTTTTGGTACTGGCCTTAACACCACTTTCCTTATTTGTTGCTCGTTTTATTGCTCAAAAGAGTTA
TCATCTTTATCAAAGACAAACCAGAGCCAGAGGGGCGTTTACTCAACATATTGAAGAGAGTCTTCGTCAGGAAAGTTTGA
TTCAAAGTTTCAATGCTCAAGATCAATTTATTCACACTTTTGATCATCTAAATAGCAAATATGCTAAGTATTCACAAGGG
GCTATTTTCTATTCATCCACAGTCAACCCTGCGACTCGTTTTATCAATGCCTTAATTTATGCGCTCTTAGCTGGTATCGG
AGCATTACGCATTATGAATGGGAATTTTACTGTGGGGCAATTGACCACTTTCTTGAATTATGTCACTCAATATACCAAAC
CCTTTAATGACATTTCAGCCGTTCTATCTGAATTACAAAGTGCTTTAGCATGTGCAGAACGTCTCTATATGATTCTTGAT
GAAAAGGATGCCAAAGATGATGGCAAGAAAGAATTAGTCAGTGAATCTGTTAAAGGTGCTATTGCCTTTGATAAGATTAG
TTTTGGTTATGATGAGAAACAAACTCTGATTAAGAATTTGTCTGTCAATATTCCACAAGGTTCCAAGGTGGCTATCGTTG
GTCCTACAGGGGCTGGAAAATCAACTCTCATTAATTTGCTGATGCGATTTTATGATTTGCGAGAAGGGCAAATACTGCTA
GATGGGCAAGCAATCACTGATTATAGTAAAGCTTCTTATCGTCAGCAGATTGGTATGGTCTTACAAGAAACTTGGCTGAA
AACGGCTACTGTTTTGGAAAATATTGCCTTTGGTTATCCTGAAGCTAGCCGCGAGCAAGTGATTGCAGCGGCAAAAGCAG
CTAATGCCGACTTTTTTATAAAACAACTTCCTCAAGGTTACGATACTTTTTTGGCCGATGCAGGAGAATCCCTATCACAA
GGGCAAAGGCAATTGTTAACGATAGCACGAATTTTTGTTCATATTCCTAAAATATTAATCTTGGATGAAGCAACTTCCTC
CATTGATACACGAACAGAAATCTTGGTCCAAGAAGCATTTGAAAAGCTTATGAAAGGACGGACCAGCTTTATTATTGCAC
ATAGATTGTCAACTATTCAAAGCGCAGACCTTATCTTAGTTATGGTAGATGGCAATATTGTTGAACAAGGAAATCATAAA
GACTTGATGCAGAAAAAAGGTGTCTATTATCAAATGCAGACAGCACAGGATAGCCTTGAAAGCTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(358-506)

ABC transporter transmembrane region (ABC_membrane)

(24-294)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

38.737

100

0.391

Multiple sequence alignment