Detailed information NTG0340827

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: F5K02_RS14075
• Genome accession: NZ_CP044132
• Coordinates: 2846286..2847554 (+)
• Length: 422 a.a.
• NCBI ID: WP_015240288.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain ZKY01
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2841286..2852554

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
F5K02_RS14055 (F5K02_14125)	-	2842657..2843307 (-)	651	WP_007408203.1	tetratricopeptide repeat protein	-
F5K02_RS14060 (F5K02_14130)	mnmA	2843365..2844480 (-)	1116	WP_012118077.1	tRNA 2-thiouridine(34) synthase MnmA	-
F5K02_RS14065 (F5K02_14135)	-	2844517..2845656 (-)	1140	WP_007408201.1	cysteine desulfurase family protein	-
F5K02_RS14070 (F5K02_14140)	cymR	2845675..2846091 (-)	417	WP_003152730.1	cysteine metabolism transcriptional regulator CymR	-
F5K02_RS14075 (F5K02_14145)	rarA	2846286..2847554 (+)	1269	WP_015240288.1	replication-associated recombination protein A	Machinery gene
F5K02_RS14080 (F5K02_14150)	-	2847670..2848434 (-)	765	WP_012118080.1	tRNA threonylcarbamoyladenosine dehydratase	-
F5K02_RS14090 (F5K02_14160)	aspS	2848760..2850538 (-)	1779	WP_007408199.1	aspartate--tRNA ligase	-
F5K02_RS14095 (F5K02_14165)	hisS	2850553..2851827 (-)	1275	WP_012118082.1	histidine--tRNA ligase	-
F5K02_RS14100	-	2852184..2852354 (-)	171	WP_012118083.1	YrzK family protein	-

Sequence

Protein

• Length: 422 a.a.
• Molecular weight: 46661.51 Da
• Isoelectric Point: 7.9149

>NTDB_id=340827 F5K02_RS14075 WP_015240288.1 2846286..2847554(+) (rarA) [Bacillus amyloliquefaciens strain ZKY01]
MKPLAYRMRPANIEDIIGQEHLVKEDKIIGRMVRAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVIHNKKDME
IVVQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALTDEHRGLGSYSVSVDDDAMDHFAQGCGGDVRSALNALELAVLSTKESSDGTIRITRETAEECLQKKSYTHDKNGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESISRRLLVIAYEDIGLASPQAGPRVLSAIQTAERIGFPEARIPLANAV
IELCLSPKSNSAISAVDEALKDIRTGKIGDVPKHLKDAHYKGAQELGRGIGYQYPHDFENGWVEQQYLPDPLKNKQYYKP
KQTGKFEAAIKQVYEKLMKQKK

Nucleotide

• Length: 1269 bp

>NTDB_id=340827 F5K02_RS14075 WP_015240288.1 2846286..2847554(+) (rarA) [Bacillus amyloliquefaciens strain ZKY01]
ATGAAACCATTGGCGTATCGGATGCGGCCTGCCAATATCGAAGACATTATCGGCCAGGAACATTTGGTCAAAGAAGATAA
AATCATCGGCAGAATGGTGCGTGCAAAGCACTTATCATCCATGATCCTGTACGGACCGCCGGGCATCGGAAAAACGTCCA
TCGCCACAGCGATCGCAGGATCGACAAGCATCGCATTCAGAAAATTGAATGCCGTCATTCATAATAAAAAAGACATGGAG
ATTGTCGTACAGGAAGCGAAAATGTCAGGCCAGGTCATTTTAATCCTTGACGAAGTGCACAGGCTTGATAAGGGAAAGCA
GGATTTTCTGCTGCCCTATTTAGAAAACGGCATGATTATTTTAATCGGCGCGACGACCGCCAATCCTTATCATGCCATTA
ACCCGGCCATCAGAAGCCGGACCCAGATCTTCGAGCTTGAACCGTTAACACCCGATCTGATCAAGCAGGCATTGGAAAGA
GCGCTCACAGATGAACACCGGGGACTCGGTTCCTACAGCGTTTCGGTGGACGACGACGCGATGGATCATTTCGCGCAAGG
GTGCGGAGGAGACGTCCGCTCCGCTTTGAACGCACTTGAGCTTGCCGTGCTCTCCACAAAGGAATCAAGCGACGGCACGA
TCCGGATTACACGGGAGACGGCGGAAGAATGTCTGCAGAAAAAAAGCTATACTCATGATAAAAACGGCGATGCGCATTAT
GACGTCTTATCCGCCTTCCAAAAATCGATCCGAGGCTCGGACGCAAACGCCGCCCTTCATTATCTGGCCCGTCTGATCGA
AGCCGGCGACCTTGAAAGCATATCAAGAAGGCTTCTCGTGATCGCCTATGAAGATATCGGCCTCGCAAGCCCGCAGGCAG
GCCCCCGGGTGCTGAGCGCGATTCAGACCGCAGAACGGATCGGCTTTCCGGAAGCGAGAATTCCGCTGGCCAATGCGGTA
ATCGAATTATGCCTCTCGCCAAAATCAAACTCCGCCATCTCAGCCGTTGATGAGGCGCTCAAAGACATCAGGACGGGTAA
AATCGGCGATGTGCCGAAACATTTAAAAGACGCCCACTATAAAGGGGCCCAAGAGCTCGGACGCGGGATCGGCTATCAAT
ATCCTCACGATTTCGAGAACGGATGGGTCGAACAGCAATATTTGCCTGATCCGTTAAAAAACAAGCAATACTATAAACCG
AAACAAACTGGGAAATTTGAAGCCGCCATAAAGCAAGTGTATGAAAAACTGATGAAGCAGAAAAAATAA

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• AAA C-terminal domain (AAA_assoc_2) (172-251)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	91.211	99.763	0.91