Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | ETK71_RS12475 | Genome accession | NZ_CP035411 |
| Coordinates | 2423860..2424897 (-) | Length | 345 a.a. |
| NCBI ID | WP_041850016.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain SRCM103622 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2418860..2429897
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ETK71_RS12425 (ETK71_12425) | tasA | 2418958..2419743 (-) | 786 | WP_015251717.1 | biofilm matrix protein TasA | - |
| ETK71_RS12430 (ETK71_12430) | sipW | 2419807..2420379 (-) | 573 | WP_003246088.1 | signal peptidase I SipW | - |
| ETK71_RS12435 (ETK71_12435) | tapA | 2420363..2421124 (-) | 762 | WP_015251716.1 | amyloid fiber anchoring/assembly protein TapA | - |
| ETK71_RS12440 (ETK71_12440) | yqzG | 2421396..2421722 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| ETK71_RS12445 (ETK71_12445) | spoIITA | 2421764..2421943 (-) | 180 | WP_003230176.1 | YqzE family protein | - |
| ETK71_RS12450 (ETK71_12450) | comGG | 2422014..2422388 (-) | 375 | WP_015251714.1 | ComG operon protein ComGG | Machinery gene |
| ETK71_RS12455 (ETK71_12455) | comGF | 2422389..2422772 (-) | 384 | WP_041850015.1 | ComG operon protein ComGF | Machinery gene |
| ETK71_RS12460 (ETK71_12460) | comGE | 2422798..2423145 (-) | 348 | WP_003230165.1 | ComG operon protein 5 | Machinery gene |
| ETK71_RS12465 (ETK71_12465) | comGD | 2423129..2423560 (-) | 432 | WP_004398628.1 | comG operon protein ComGD | Machinery gene |
| ETK71_RS12470 (ETK71_12470) | comGC | 2423550..2423846 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| ETK71_RS12475 (ETK71_12475) | comGB | 2423860..2424897 (-) | 1038 | WP_041850016.1 | comG operon protein ComGB | Machinery gene |
| ETK71_RS12480 (ETK71_12480) | comGA | 2424884..2425954 (-) | 1071 | WP_004399124.1 | competence protein ComGA | Machinery gene |
| ETK71_RS12490 (ETK71_12490) | corA | 2426365..2427318 (-) | 954 | WP_029317911.1 | magnesium transporter CorA | - |
| ETK71_RS12495 (ETK71_12495) | yqhB | 2427461..2428789 (+) | 1329 | WP_041850018.1 | hemolysin family protein | - |
| ETK71_RS12500 (ETK71_12500) | rsbRD | 2428842..2429678 (-) | 837 | WP_041850019.1 | RsbT co-antagonist protein RsbRD | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39728.18 Da Isoelectric Point: 9.6257
>NTDB_id=340724 ETK71_RS12475 WP_041850016.1 2423860..2424897(-) (comGB) [Bacillus subtilis strain SRCM103622]
MKKIRKVWLLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAALILLVYLSMLVPMYQMMNQM
MKKIRKVWLLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAALILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=340724 ETK71_RS12475 WP_041850016.1 2423860..2424897(-) (comGB) [Bacillus subtilis strain SRCM103622]
ATGAAAAAGATTAGAAAAGTCTGGTTGTTAAAGGATCAAGCCAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACACTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCAATGATTCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTAAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGCTGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTTGTTAAAGGATCAAGCCAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACACTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCAATGATTCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTAAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGCTGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
99.381 |
93.623 |
0.93 |