Detailed information    

insolico Bioinformatically predicted

Overview

Name   clpP   Type   Regulator
Locus tag   FOB62_RS02820 Genome accession   NZ_CP044102
Coordinates   568239..568829 (-) Length   196 a.a.
NCBI ID   WP_002985850.1    Uniprot ID   A0A9X9QW05
Organism   Streptococcus dysgalactiae strain FDAARGOS_654     
Function   degradation of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 563239..573829
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOB62_RS02790 (FOB62_02790) - 563300..564253 (-) 954 WP_150336170.1 branched-chain amino acid ABC transporter permease -
  FOB62_RS02795 (FOB62_02795) - 564257..565126 (-) 870 WP_015057356.1 branched-chain amino acid ABC transporter permease -
  FOB62_RS02800 (FOB62_02800) - 565315..566487 (-) 1173 WP_003058679.1 ABC transporter substrate-binding protein -
  FOB62_RS02805 (FOB62_02805) - 566736..567026 (-) 291 WP_003060978.1 YlbG family protein -
  FOB62_RS02810 (FOB62_02810) - 567002..567472 (-) 471 WP_014612055.1 YlbF family regulator -
  FOB62_RS02815 (FOB62_02815) - 567547..567843 (-) 297 WP_014612054.1 DUF4298 domain-containing protein -
  FOB62_RS02820 (FOB62_02820) clpP 568239..568829 (-) 591 WP_002985850.1 ATP-dependent Clp protease proteolytic subunit Regulator
  FOB62_RS02825 (FOB62_02825) upp 569051..569680 (-) 630 WP_003058279.1 uracil phosphoribosyltransferase -
  FOB62_RS02830 (FOB62_02830) - 569894..570979 (+) 1086 WP_150336171.1 IS30 family transposase -
  FOB62_RS02835 (FOB62_02835) - 570965..572599 (-) 1635 WP_014612052.1 polysaccharide biosynthesis protein -

Sequence

Protein


Download         Length: 196 a.a.        Molecular weight: 21648.88 Da        Isoelectric Point: 5.2834

>NTDB_id=340554 FOB62_RS02820 WP_002985850.1 568239..568829(-) (clpP) [Streptococcus dysgalactiae strain FDAARGOS_654]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKADVQTIVMGMAASMGTVIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRHRLEKILAQNAGK
TIKQIHKDAERDYWMSAEETLAYGFIDEIMENNELK

Nucleotide


Download         Length: 591 bp        

>NTDB_id=340554 FOB62_RS02820 WP_002985850.1 568239..568829(-) (clpP) [Streptococcus dysgalactiae strain FDAARGOS_654]
ATGATTCCTGTTGTTATTGAACAAACTAGTCGTGGTGAACGTTCTTATGACATTTACTCACGCTTATTAAAAGACCGTAT
TATCATGTTGACAGGCCCTGTTGAGGACAACATGGCAAACTCTGTCATTGCGCAGCTTTTATTCCTTGATGCTCAGGACA
ATACGAAAGACATTTATTTGTATGTCAACACACCTGGTGGTTCTGTTTCAGCGGGTTTGGCTATTGTCGACACCATGAAC
TTTATCAAAGCTGATGTCCAAACCATTGTTATGGGGATGGCCGCTTCTATGGGGACTGTAATTGCTTCATCAGGTACTAA
GGGCAAACGCTTCATGTTACCAAATGCAGAATACATGATTCACCAACCAATGGGTGGTACAGGTGGTGGTACACAACAAA
CAGATATGGCCATTGCTGCAGAGCACCTCTTAAAAACTCGTCACCGTTTAGAAAAAATCTTAGCACAAAATGCTGGAAAG
ACCATTAAACAAATTCACAAAGATGCTGAACGTGATTATTGGATGAGTGCTGAAGAAACCTTGGCTTACGGTTTCATTGA
TGAAATCATGGAAAATAACGAATTAAAATAA

Domains

Predicted by InterProScan.

Clp protease (CLP_protease)

(11-192)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A9X9QW05

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  clpP Streptococcus pyogenes MGAS315

100

100

1
  clpP Streptococcus pyogenes JRS4

100

100

1
  clpP Streptococcus mutans UA159

90.816

100

0.908
  clpP Streptococcus pneumoniae Rx1

90.769

99.49

0.903
  clpP Streptococcus pneumoniae D39

90.769

99.49

0.903
  clpP Streptococcus pneumoniae R6

90.769

99.49

0.903
  clpP Streptococcus pneumoniae TIGR4

90.769

99.49

0.903
  clpP Streptococcus thermophilus LMG 18311

89.796

100

0.898
  clpP Streptococcus thermophilus LMD-9

89.796

100

0.898
  clpP Lactococcus lactis subsp. lactis strain DGCC12653

86.224

100

0.862
  clpP Lactococcus lactis subsp. cremoris KW2

85.714

100

0.857
  clpP Bacillus subtilis subsp. subtilis str. 168

57.143

100

0.571
  clpP Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

56.995

98.469

0.561

Multiple sequence alignment