Detailed information    

insolico Bioinformatically predicted

Overview

Name   recO   Type   Machinery gene
Locus tag   FOB76_RS04095 Genome accession   NZ_CP044093
Coordinates   773796..774551 (-) Length   251 a.a.
NCBI ID   WP_002986719.1    Uniprot ID   A2RBY9
Organism   Streptococcus pyogenes strain FDAARGOS_668     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 768796..779551
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOB76_RS04080 (FOB76_04080) purC 771596..772300 (-) 705 WP_002987701.1 phosphoribosylaminoimidazolesuccinocarboxamide synthase -
  FOB76_RS04085 (FOB76_04085) - 772451..772693 (-) 243 WP_002987699.1 phosphopantetheine-binding protein -
  FOB76_RS04090 (FOB76_04090) plsX 772686..773693 (-) 1008 WP_002987696.1 phosphate acyltransferase PlsX -
  FOB76_RS04095 (FOB76_04095) recO 773796..774551 (-) 756 WP_002986719.1 DNA repair protein RecO Machinery gene
  FOB76_RS04100 (FOB76_04100) - 774737..775699 (-) 963 WP_009880326.1 ribose-phosphate diphosphokinase -
  FOB76_RS04105 (FOB76_04105) pcsB 775952..777148 (-) 1197 WP_011527425.1 peptidoglycan hydrolase PcsB -
  FOB76_RS09765 (FOB76_04110) - 777645..777851 (+) 207 WP_002987688.1 transposase -

Sequence

Protein


Download         Length: 251 a.a.        Molecular weight: 29516.97 Da        Isoelectric Point: 6.9077

>NTDB_id=340478 FOB76_RS04095 WP_002986719.1 773796..774551(-) (recO) [Streptococcus pyogenes strain FDAARGOS_668]
MQLTESLGIVLFNRNYREDDKLVKIFTEVAGKQMFFVKHISRSKMSSIIQPLTIADFIFKLNDTGLSYVVDYSNVNTYRY
INNDIFRLAYASYVLALADAAIADNESDSHLFTFLKKTLDLMEEGLDYEILTNIFEIQILDRFGISLNFHECAICHRTDL
PLDFSHRFSAVLCSEHYYKDNRRNHLDPNVIYLLSRFQKITFDDLRTISLNKDIKKKLRQFIDELYHDYVGIKLKSKTFI
DNLVKWGDIMK

Nucleotide


Download         Length: 756 bp        

>NTDB_id=340478 FOB76_RS04095 WP_002986719.1 773796..774551(-) (recO) [Streptococcus pyogenes strain FDAARGOS_668]
ATGCAACTAACAGAATCACTAGGCATCGTTCTTTTTAATAGGAATTATCGAGAAGATGATAAATTAGTCAAAATATTTAC
TGAAGTAGCAGGTAAGCAGATGTTTTTCGTGAAACATATTAGTCGTTCCAAAATGTCCTCAATCATTCAACCACTAACGA
TTGCTGATTTTATTTTCAAGTTAAATGATACAGGCTTGTCTTATGTTGTTGACTATAGTAACGTTAACACTTATCGGTAT
ATTAATAATGATATTTTTCGATTAGCCTATGCTAGTTATGTCTTAGCATTAGCTGATGCTGCGATTGCAGATAATGAATC
AGATTCGCATTTGTTTACGTTTTTGAAAAAAACACTTGATTTGATGGAAGAGGGCCTAGATTATGAAATTTTGACAAATA
TTTTTGAAATTCAGATATTAGATCGTTTTGGTATTAGTCTAAACTTTCATGAGTGTGCCATTTGTCATCGCACTGATTTA
CCGCTTGATTTTTCCCATCGTTTTTCAGCTGTACTTTGTTCTGAACATTATTACAAAGACAACCGACGTAATCATTTAGA
TCCAAATGTTATCTACTTGTTGAGTCGATTTCAAAAAATCACATTTGATGATTTGAGAACTATTTCATTGAATAAAGACA
TCAAAAAGAAGCTTCGTCAGTTCATTGATGAGTTGTATCACGACTATGTAGGAATCAAATTAAAAAGTAAAACATTCATT
GATAATTTAGTTAAGTGGGGAGATATTATGAAATGA

Domains

Predicted by InterProScan.

Recombination protein O C terminal (RecO_C)

(83-237)

Recombination protein O N terminal (RecO_N)

(1-73)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A2RBY9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recO Streptococcus pneumoniae R6

60.159

100

0.602

Multiple sequence alignment