Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | ES969_RS12910 | Genome accession | NZ_CP035402 |
| Coordinates | 2376729..2377064 (+) | Length | 111 a.a. |
| NCBI ID | WP_003226345.1 | Uniprot ID | A0AAE2VGU9 |
| Organism | Bacillus subtilis strain SRCM103576 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2371729..2382064
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ES969_RS12890 (ES969_12890) | gcvT | 2372321..2373409 (-) | 1089 | WP_129134000.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| ES969_RS12895 (ES969_12895) | hepAA | 2373851..2375524 (+) | 1674 | WP_014480248.1 | SNF2-related protein | - |
| ES969_RS12900 (ES969_12900) | yqhG | 2375545..2376339 (+) | 795 | WP_014480249.1 | YqhG family protein | - |
| ES969_RS12905 (ES969_12905) | sinI | 2376522..2376695 (+) | 174 | WP_003230187.1 | anti-repressor SinI | Regulator |
| ES969_RS12910 (ES969_12910) | sinR | 2376729..2377064 (+) | 336 | WP_003226345.1 | transcriptional regulator SinR | Regulator |
| ES969_RS12915 (ES969_12915) | tasA | 2377157..2377942 (-) | 786 | WP_014480250.1 | biofilm matrix protein TasA | - |
| ES969_RS12920 (ES969_12920) | sipW | 2378007..2378579 (-) | 573 | WP_129134142.1 | signal peptidase I SipW | - |
| ES969_RS12925 (ES969_12925) | tapA | 2378563..2379324 (-) | 762 | WP_014480251.1 | amyloid fiber anchoring/assembly protein TapA | - |
| ES969_RS12930 (ES969_12930) | yqzG | 2379596..2379922 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| ES969_RS12935 (ES969_12935) | spoIITA | 2379964..2380143 (-) | 180 | WP_029726723.1 | YqzE family protein | - |
| ES969_RS12940 (ES969_12940) | comGG | 2380215..2380589 (-) | 375 | WP_014480253.1 | ComG operon protein ComGG | Machinery gene |
| ES969_RS12945 (ES969_12945) | comGF | 2380590..2380973 (-) | 384 | WP_046160582.1 | ComG operon protein ComGF | Machinery gene |
| ES969_RS12950 (ES969_12950) | comGE | 2380999..2381346 (-) | 348 | WP_046160583.1 | ComG operon protein 5 | Machinery gene |
| ES969_RS12955 (ES969_12955) | comGD | 2381330..2381761 (-) | 432 | WP_014480256.1 | comG operon protein ComGD | Machinery gene |
| ES969_RS12960 (ES969_12960) | comGC | 2381751..2382047 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12988.64 Da Isoelectric Point: 7.2023
>NTDB_id=340258 ES969_RS12910 WP_003226345.1 2376729..2377064(+) (sinR) [Bacillus subtilis strain SRCM103576]
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
Nucleotide
Download Length: 336 bp
>NTDB_id=340258 ES969_RS12910 WP_003226345.1 2376729..2377064(+) (sinR) [Bacillus subtilis strain SRCM103576]
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |