Detailed information NTG0340126

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: FOB75_RS06945
• Genome accession: NZ_CP044062
• Coordinates: 1352598..1353887 (-)
• Length: 429 a.a.
• NCBI ID: WP_265589361.1
• Uniprot ID: -
• Organism: Vibrio parahaemolyticus strain FDAARGOS_667
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1347598..1358887

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FOB75_RS06920 (FOB75_06920)	bioA	1348078..1349358 (+)	1281	WP_045546140.1	adenosylmethionine--8-amino-7-oxononanoate transaminase	-
FOB75_RS06925 (FOB75_06925)	-	1349428..1349694 (-)	267	WP_069490477.1	DksA/TraR family C4-type zinc finger protein	-
FOB75_RS06930 (FOB75_06930)	-	1349829..1350269 (-)	441	WP_069490476.1	hypothetical protein	-
FOB75_RS06935 (FOB75_06935)	-	1350263..1350829 (-)	567	WP_021453009.1	hypothetical protein	-
FOB75_RS06940 (FOB75_06940)	serS	1351199..1352506 (-)	1308	WP_005495761.1	serine--tRNA ligase	-
FOB75_RS06945 (FOB75_06945)	rarA	1352598..1353887 (-)	1290	WP_265589361.1	replication-associated recombination protein A	Machinery gene
FOB75_RS06950 (FOB75_06950)	lolA	1353954..1354580 (-)	627	WP_046269080.1	outer membrane lipoprotein chaperone LolA	-
FOB75_RS06955 (FOB75_06955)	-	1354655..1357741 (-)	3087	WP_080534497.1	DNA translocase FtsK	-
FOB75_RS06960 (FOB75_06960)	lrp	1357894..1358388 (-)	495	WP_005378234.1	leucine-responsive transcriptional regulator Lrp	-

Sequence

Protein

• Length: 429 a.a.
• Molecular weight: 47626.78 Da
• Isoelectric Point: 5.6761

>NTDB_id=340126 FOB75_RS06945 WP_265589361.1 1352598..1353887(-) (rarA) [Vibrio parahaemolyticus strain FDAARGOS_667]
MRPQTIEQYIGQQHILGPGKPLRRALEAGHVHSMILWGPPGTGKTTLAEVAANYANAEVERVSAVTSGVKEIRAAIEKAR
ENKMAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTVTFIGATTENPSFELNNALLSRARVYKLTSLDKEEISLALNQAIN
DKERGLGDTPANFADNVLDRLAELVNGDARMSLNYLELLYDMAEENDQGEKEITLKLLAEVAGEKVSRFDNKGDIWYDLI
SAVHKSIRGSNPDAALYWAARMIAAGCDPLYIARRLLAIASEDVGNADPRAMQVALSAWDCFTRVGPAEGERAIAQAIVY
LACAPKSNAVYVAWKQALTDAHNLPEYEVPHHLRNAPTSLMKDMGYGAEYRYAHDEPGAYAAGEQYLPTEMADRKYYQPT
NRGLETKIGEKLDYLAKLDANSQQKRYEK

Nucleotide

• Length: 1290 bp

>NTDB_id=340126 FOB75_RS06945 WP_265589361.1 1352598..1353887(-) (rarA) [Vibrio parahaemolyticus strain FDAARGOS_667]
ATGAGACCGCAAACTATTGAGCAGTACATCGGTCAGCAACACATTCTTGGCCCGGGTAAACCCCTGCGTCGCGCGTTAGA
GGCTGGCCATGTCCACTCAATGATCCTTTGGGGGCCTCCTGGTACAGGTAAAACCACGTTAGCGGAAGTCGCTGCTAATT
ACGCCAATGCGGAAGTTGAACGCGTGTCTGCGGTGACGTCCGGTGTGAAAGAGATTCGTGCTGCAATCGAAAAAGCGCGC
GAGAACAAAATGGCGGGTCGCCGCACCATCTTGTTTGTGGATGAGGTTCATCGCTTCAACAAATCGCAACAAGATGCTTT
CTTACCACATATTGAAGATGGAACCGTCACGTTTATTGGCGCAACGACAGAGAACCCATCTTTCGAACTGAATAACGCAT
TGCTGTCTCGTGCTCGAGTCTACAAGCTGACTTCACTGGATAAAGAAGAGATCTCACTCGCACTAAATCAAGCGATTAAC
GACAAAGAACGAGGCCTGGGCGATACGCCAGCGAACTTTGCTGATAATGTGTTAGACCGTCTAGCCGAGTTGGTGAACGG
CGATGCTCGCATGTCTCTTAACTACCTTGAGCTTCTCTACGATATGGCAGAAGAGAATGATCAAGGTGAAAAAGAGATAA
CACTCAAACTGCTTGCTGAAGTAGCCGGGGAGAAAGTCTCTCGCTTCGATAATAAAGGCGACATTTGGTACGATTTGATC
TCCGCTGTGCACAAATCTATTCGTGGGTCAAACCCAGATGCCGCTTTGTATTGGGCTGCTCGTATGATAGCTGCAGGTTG
TGATCCACTTTACATTGCCCGTCGATTACTTGCGATAGCATCGGAAGATGTCGGCAATGCGGACCCTAGAGCCATGCAAG
TTGCACTCTCCGCGTGGGACTGTTTTACACGCGTTGGTCCAGCAGAGGGTGAGCGTGCGATTGCTCAAGCAATTGTTTAT
CTCGCGTGCGCTCCAAAGAGTAATGCCGTTTATGTTGCTTGGAAACAAGCGCTCACTGACGCACATAACTTGCCTGAATA
TGAAGTGCCGCATCACTTGCGTAATGCACCCACCAGTCTGATGAAAGACATGGGCTATGGCGCAGAATATCGATATGCTC
ACGACGAGCCGGGTGCTTATGCAGCGGGTGAGCAATATTTGCCAACAGAAATGGCGGATCGTAAGTACTATCAGCCGACA
AATCGCGGTCTAGAAACCAAAATCGGCGAAAAGTTAGATTACTTGGCTAAATTAGACGCAAATAGCCAACAAAAGCGCTA
TGAAAAGTAG

Domains

Predicted by InterProScan.

• ATPase family associated with various cellular activities (AAA) (AAA) (34-139)

• AAA C-terminal domain (AAA_assoc_2) (170-248)

• MgsA AAA+ ATPase C terminal (MgsA_C) (249-415)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	39.474	97.436	0.385