Detailed information NTG0339695

Bioinformatically predicted

Overview

• Name: codY
• Type: Regulator
• Locus tag: ES966_RS09010
• Genome accession: NZ_CP035393
• Coordinates: 1760336..1761115 (+)
• Length: 259 a.a.
• NCBI ID: WP_017417775.1
• Uniprot ID: A0A411A618
• Organism: Bacillus velezensis strain SRCM103691
• Function: repression of comK (predicted from homology) Competence regulation

Genomic Context

Location: 1755336..1766115

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ES966_RS08990 (ES966_08990)	trmFO	1756024..1757331 (+)	1308	WP_012117550.1	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	-
ES966_RS08995 (ES966_08995)	xerC	1757401..1758318 (+)	918	WP_007409774.1	tyrosine recombinase XerC	-
ES966_RS09000 (ES966_09000)	hslV	1758334..1758879 (+)	546	WP_003154267.1	ATP-dependent protease subunit HslV	-
ES966_RS09005 (ES966_09005)	hslU	1758896..1760298 (+)	1403	Protein_1717	HslU--HslV peptidase ATPase subunit	-
ES966_RS09010 (ES966_09010)	codY	1760336..1761115 (+)	780	WP_017417775.1	GTP-sensing pleiotropic transcriptional regulator CodY	Regulator
ES966_RS09015 (ES966_09015)	flgB	1761469..1761858 (+)	390	WP_003154260.1	flagellar basal body rod protein FlgB	-
ES966_RS09020 (ES966_09020)	flgC	1761858..1762310 (+)	453	WP_003154259.1	flagellar basal body rod protein FlgC	-
ES966_RS09025 (ES966_09025)	fliE	1762321..1762641 (+)	321	WP_110085558.1	flagellar hook-basal body complex protein FliE	-
ES966_RS09030 (ES966_09030)	fliF	1762684..1764294 (+)	1611	WP_022553346.1	flagellar basal-body MS-ring/collar protein FliF	-
ES966_RS09035 (ES966_09035)	fliG	1764307..1765323 (+)	1017	WP_003154256.1	flagellar motor switch protein FliG	-
ES966_RS09040 (ES966_09040)	fliH	1765316..1766071 (+)	756	WP_129093712.1	flagellar assembly protein FliH	-

Sequence

Protein

• Length: 259 a.a.
• Molecular weight: 29055.26 Da
• Isoelectric Point: 4.6560

>NTDB_id=339695 ES966_RS09010 WP_017417775.1 1760336..1761115(+) (codY) [Bacillus velezensis strain SRCM103691]
MALLQKTRIINSMLQAAAGKPVNFKEMAETLRDVIDSNIFVVSRRGKLLGYSINQQIENDRMKKMLEDRQFPEEYTRNLF
NVPETSSNLDINSEYTAFPVENRDLFQAGLTTIVPIIGGGERLGTLILSRLQNQFEDDDLILAEYGATVVGMEILREKAE
EIEEEARSKAVVQMAISSLSYSELEAIEHIFEELDGNEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGT
YIKVLNNKFLIELENLKSH

Nucleotide

• Length: 780 bp

>NTDB_id=339695 ES966_RS09010 WP_017417775.1 1760336..1761115(+) (codY) [Bacillus velezensis strain SRCM103691]
ATGGCTTTACTACAAAAAACACGAATTATTAACAGCATGCTGCAGGCTGCGGCAGGCAAACCCGTAAACTTTAAAGAAAT
GGCTGAAACGCTTCGTGACGTCATTGATTCTAATATTTTCGTCGTCAGCCGCAGAGGAAAGCTTTTGGGCTACTCTATTA
ATCAGCAGATTGAAAATGACCGCATGAAAAAAATGCTTGAAGACCGCCAGTTCCCGGAAGAGTACACGAGAAATCTGTTC
AATGTTCCGGAGACGTCTTCAAACCTTGATATCAACAGCGAATACACGGCGTTTCCTGTGGAAAACAGAGACCTGTTCCA
AGCGGGCTTAACAACGATCGTGCCGATCATCGGCGGAGGAGAGAGACTGGGCACGCTCATTCTGTCCCGTCTGCAGAATC
AATTTGAAGATGATGATCTAATTCTTGCTGAATACGGAGCAACCGTTGTAGGAATGGAGATTTTAAGAGAAAAAGCGGAA
GAAATCGAAGAAGAGGCGCGAAGCAAAGCAGTTGTTCAAATGGCGATCAGTTCTCTGTCTTACAGTGAACTTGAAGCGAT
TGAGCATATCTTTGAAGAGCTTGACGGAAACGAAGGCTTGCTTGTGGCAAGTAAGATTGCGGACCGTGTCGGCATTACGC
GTTCAGTCATCGTTAACGCGCTGAGAAAACTGGAAAGCGCAGGCGTCATTGAATCCAGATCACTGGGAATGAAGGGGACG
TACATTAAAGTTCTGAACAACAAATTCCTTATTGAATTGGAAAACCTTAAATCTCATTAA

Domains

Predicted by InterproScan.

• CodY GAF-like domain (CodY) (3-178)

• CodY helix-turn-helix domain (HTH_CodY) (198-255)

3D structure

• AlphaFold DB: A0A411A618

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
codY	Bacillus subtilis subsp. subtilis str. 168	98.842	100	0.988
codY	Lactococcus lactis subsp. lactis strain DGCC12653	47.843	98.456	0.471