Detailed information
Bioinformatically predicted
Overview
| Name | codY | Type | Regulator |
| Locus tag | BAMEG_RS03665 | Genome accession | NC_012581 |
| Coordinates | 594654..595433 (+) | Length | 259 a.a. |
| NCBI ID | WP_000421288.1 | Uniprot ID | Q81WK7 |
| Organism | Bacillus anthracis str. CDC 684 | ||
| Function | repression of comK (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 555831..629755 | 594654..595433 | within | 0 |
Gene organization within MGE regions
Location: 555831..629755
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BAMEG_RS03475 (BAMEG_0628) | rsmB | 555989..557323 (+) | 1335 | WP_001249680.1 | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | - |
| BAMEG_RS03480 (BAMEG_0629) | rlmN | 557328..558416 (+) | 1089 | WP_000450542.1 | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN | - |
| BAMEG_RS03485 (BAMEG_0630) | - | 558421..559173 (+) | 753 | WP_000648699.1 | Stp1/IreP family PP2C-type Ser/Thr phosphatase | - |
| BAMEG_RS03490 (BAMEG_0631) | prkC | 559182..561155 (+) | 1974 | WP_000904759.1 | serine/threonine protein kinase PrkC | - |
| BAMEG_RS03495 (BAMEG_0632) | rsgA | 561424..562305 (+) | 882 | WP_001113935.1 | ribosome small subunit-dependent GTPase A | - |
| BAMEG_RS03500 (BAMEG_0633) | rpe | 562308..562952 (+) | 645 | WP_000589966.1 | ribulose-phosphate 3-epimerase | - |
| BAMEG_RS03505 (BAMEG_0634) | - | 563052..563732 (+) | 681 | WP_025388434.1 | thiamine diphosphokinase | - |
| BAMEG_RS03510 | spoVM | 563799..563879 (+) | 81 | WP_001213599.1 | stage V sporulation protein SpoVM | - |
| BAMEG_RS03515 (BAMEG_0635) | rpmB | 563952..564140 (-) | 189 | WP_000124778.1 | 50S ribosomal protein L28 | - |
| BAMEG_RS03520 (BAMEG_0636) | - | 564519..564881 (+) | 363 | WP_000021109.1 | Asp23/Gls24 family envelope stress response protein | - |
| BAMEG_RS03525 (BAMEG_0637) | - | 564904..566580 (+) | 1677 | WP_000027136.1 | DAK2 domain-containing protein | - |
| BAMEG_RS03530 (BAMEG_0638) | recG | 566870..568918 (+) | 2049 | WP_001006884.1 | ATP-dependent DNA helicase RecG | - |
| BAMEG_RS03535 (BAMEG_0639) | fapR | 569007..569600 (+) | 594 | WP_000747352.1 | transcription factor FapR | - |
| BAMEG_RS03540 (BAMEG_0640) | plsX | 569597..570589 (+) | 993 | WP_000684111.1 | phosphate acyltransferase PlsX | - |
| BAMEG_RS03545 (BAMEG_0641) | fabD | 570604..571548 (+) | 945 | WP_000516958.1 | ACP S-malonyltransferase | - |
| BAMEG_RS03550 (BAMEG_0642) | fabG | 571548..572288 (+) | 741 | WP_000911782.1 | 3-oxoacyl-[acyl-carrier-protein] reductase | - |
| BAMEG_RS03555 (BAMEG_0643) | acpP | 572358..572591 (+) | 234 | WP_000786062.1 | acyl carrier protein | - |
| BAMEG_RS03560 (BAMEG_0644) | rncS | 572650..573387 (+) | 738 | WP_001146873.1 | ribonuclease III | - |
| BAMEG_RS03565 (BAMEG_0645) | smc | 573534..577103 (+) | 3570 | WP_000478985.1 | chromosome segregation protein SMC | - |
| BAMEG_RS03570 (BAMEG_0646) | ftsY | 577119..578108 (+) | 990 | WP_000007650.1 | signal recognition particle-docking protein FtsY | - |
| BAMEG_RS03575 (BAMEG_0647) | - | 578242..578574 (+) | 333 | WP_000891062.1 | putative DNA-binding protein | - |
| BAMEG_RS03580 (BAMEG_0648) | ffh | 578587..579936 (+) | 1350 | WP_000863456.1 | signal recognition particle protein | - |
| BAMEG_RS03585 (BAMEG_0649) | rpsP | 580037..580309 (+) | 273 | WP_000268750.1 | 30S ribosomal protein S16 | - |
| BAMEG_RS03590 (BAMEG_0650) | - | 580324..580551 (+) | 228 | WP_000737398.1 | KH domain-containing protein | - |
| BAMEG_RS03595 (BAMEG_0651) | rimM | 580672..581187 (+) | 516 | WP_000170269.1 | ribosome maturation factor RimM | - |
| BAMEG_RS03600 (BAMEG_0652) | trmD | 581187..581921 (+) | 735 | WP_000686892.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| BAMEG_RS03605 (BAMEG_0654) | rplS | 582068..582412 (+) | 345 | WP_001186516.1 | 50S ribosomal protein L19 | - |
| BAMEG_RS03610 (BAMEG_0655) | lepB | 582514..583065 (+) | 552 | WP_000711857.1 | signal peptidase I | - |
| BAMEG_RS03615 (BAMEG_0656) | ylqF | 583086..583976 (+) | 891 | WP_000236707.1 | ribosome biogenesis GTPase YlqF | - |
| BAMEG_RS03620 (BAMEG_0657) | rnhB | 584028..584801 (+) | 774 | WP_001174712.1 | ribonuclease HII | - |
| BAMEG_RS03625 (BAMEG_0658) | sucC | 584995..586155 (+) | 1161 | WP_001020786.1 | ADP-forming succinate--CoA ligase subunit beta | - |
| BAMEG_RS03630 (BAMEG_0659) | sucD | 586176..587078 (+) | 903 | WP_000115178.1 | succinate--CoA ligase subunit alpha | - |
| BAMEG_RS03635 (BAMEG_0660) | dprA | 587400..588034 (+) | 635 | Protein_568 | DNA-processing protein DprA | - |
| BAMEG_RS03640 (BAMEG_0661) | topA | 588179..590257 (+) | 2079 | WP_001286969.1 | type I DNA topoisomerase | - |
| BAMEG_RS03645 (BAMEG_0662) | trmFO | 590308..591612 (+) | 1305 | WP_003161605.1 | FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO | - |
| BAMEG_RS03650 (BAMEG_0663) | xerC | 591678..592577 (+) | 900 | WP_001101221.1 | tyrosine recombinase XerC | - |
| BAMEG_RS03655 (BAMEG_0664) | hslV | 592620..593162 (+) | 543 | WP_000526272.1 | ATP-dependent protease proteolytic subunit HslV | - |
| BAMEG_RS03660 (BAMEG_0665) | hslU | 593185..594576 (+) | 1392 | WP_000550088.1 | ATP-dependent protease ATPase subunit HslU | - |
| BAMEG_RS03665 (BAMEG_0666) | codY | 594654..595433 (+) | 780 | WP_000421288.1 | GTP-sensing pleiotropic transcriptional regulator CodY | Regulator |
| BAMEG_RS03670 (BAMEG_0667) | rpsB | 595783..596484 (+) | 702 | WP_000111483.1 | 30S ribosomal protein S2 | - |
| BAMEG_RS03675 (BAMEG_0668) | tsf | 596588..597475 (+) | 888 | WP_001018581.1 | translation elongation factor Ts | - |
| BAMEG_RS03680 (BAMEG_0669) | pyrH | 597542..598264 (+) | 723 | WP_000042663.1 | UMP kinase | - |
| BAMEG_RS03685 (BAMEG_0670) | frr | 598267..598824 (+) | 558 | WP_000531503.1 | ribosome recycling factor | - |
| BAMEG_RS03690 (BAMEG_0671) | uppS | 598910..599686 (+) | 777 | WP_000971303.1 | isoprenyl transferase | - |
| BAMEG_RS03695 (BAMEG_0672) | cdsA | 599704..600495 (+) | 792 | WP_000813581.1 | phosphatidate cytidylyltransferase | - |
| BAMEG_RS03700 (BAMEG_0673) | dxr | 600519..601661 (+) | 1143 | WP_000790359.1 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase | - |
| BAMEG_RS03705 (BAMEG_0674) | rseP | 601678..602934 (+) | 1257 | WP_001090228.1 | RIP metalloprotease RseP | - |
| BAMEG_RS03710 (BAMEG_0675) | - | 603044..604744 (+) | 1701 | WP_000814312.1 | proline--tRNA ligase | - |
| BAMEG_RS03715 (BAMEG_0676) | - | 604869..609170 (+) | 4302 | WP_000059985.1 | PolC-type DNA polymerase III | - |
| BAMEG_RS03720 (BAMEG_0677) | rimP | 609503..609973 (+) | 471 | WP_000359097.1 | ribosome maturation factor RimP | - |
| BAMEG_RS03725 (BAMEG_0678) | nusA | 609991..611097 (+) | 1107 | WP_000102609.1 | transcription termination factor NusA | - |
| BAMEG_RS03730 (BAMEG_0679) | rnpM | 611109..611381 (+) | 273 | WP_000071128.1 | RNase P modulator RnpM | - |
| BAMEG_RS03735 (BAMEG_0680) | - | 611382..611693 (+) | 312 | WP_001286523.1 | YlxQ family RNA-binding protein | - |
| BAMEG_RS03740 (BAMEG_0681) | infB | 611698..613758 (+) | 2061 | WP_000036339.1 | translation initiation factor IF-2 | - |
| BAMEG_RS03745 (BAMEG_0682) | - | 613755..614036 (+) | 282 | WP_000582364.1 | DUF503 domain-containing protein | - |
| BAMEG_RS03750 (BAMEG_0683) | rbfA | 614052..614408 (+) | 357 | WP_000776446.1 | 30S ribosome-binding factor RbfA | - |
| BAMEG_RS03755 (BAMEG_0684) | truB | 614495..615418 (+) | 924 | WP_000399357.1 | tRNA pseudouridine(55) synthase TruB | - |
| BAMEG_RS03760 (BAMEG_0685) | ribF | 615462..616433 (+) | 972 | WP_000766711.1 | bifunctional riboflavin kinase/FAD synthetase | - |
| BAMEG_RS03765 (BAMEG_0686) | rpsO | 616534..616803 (+) | 270 | WP_001229392.1 | 30S ribosomal protein S15 | - |
| BAMEG_RS03770 (BAMEG_0687) | pnp | 616964..619102 (+) | 2139 | WP_000076750.1 | polyribonucleotide nucleotidyltransferase | - |
| BAMEG_RS03775 (BAMEG_0688) | - | 619254..620153 (+) | 900 | WP_000647529.1 | polysaccharide deacetylase family protein | - |
| BAMEG_RS03780 (BAMEG_0689) | - | 620240..621481 (+) | 1242 | WP_000592993.1 | M16 family metallopeptidase | - |
| BAMEG_RS03785 (BAMEG_0690) | - | 621608..621859 (+) | 252 | WP_001239752.1 | YlmC/YmxH family sporulation protein | - |
| BAMEG_RS03790 (BAMEG_0691) | dpaA | 622134..623036 (+) | 903 | WP_000954726.1 | dipicolinic acid synthetase subunit A | - |
| BAMEG_RS03795 (BAMEG_0692) | dpaB | 623033..623632 (+) | 600 | WP_001049484.1 | dipicolinate synthase subunit B | - |
| BAMEG_RS03800 (BAMEG_0693) | asd | 623783..624829 (+) | 1047 | WP_000414849.1 | aspartate-semialdehyde dehydrogenase | - |
| BAMEG_RS03805 (BAMEG_0694) | dapG | 624853..626085 (+) | 1233 | WP_000692470.1 | aspartate kinase | - |
| BAMEG_RS03810 (BAMEG_0695) | dapA | 626097..626975 (+) | 879 | WP_000564761.1 | 4-hydroxy-tetrahydrodipicolinate synthase | - |
| BAMEG_RS03820 (BAMEG_0696) | - | 627741..629411 (+) | 1671 | WP_000823085.1 | ribonuclease J | - |
Sequence
Protein
Download Length: 259 a.a. Molecular weight: 28774.05 Da Isoelectric Point: 4.7947
>NTDB_id=33862 BAMEG_RS03665 WP_000421288.1 594654..595433(+) (codY) [Bacillus anthracis str. CDC 684]
MELLAKTRKLNALLQSAAGKPVNFREMSDTMCEVIEANVFVVSRRGKLLGYAIHQQIENERMKQMLAERQFPEEYTQSLF
NITETSSNLDVNSAYTAFPVENKELFGQGLTTIVPIVGGGERLGTLVLARLGQEFLDDDLILAEYSSTVVGMEILREKAE
EIEEEARSKAVVQMAISSLSYSELEAIEHIFEELNGTEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGT
YIKVLNDKFLHELAKLKTN
MELLAKTRKLNALLQSAAGKPVNFREMSDTMCEVIEANVFVVSRRGKLLGYAIHQQIENERMKQMLAERQFPEEYTQSLF
NITETSSNLDVNSAYTAFPVENKELFGQGLTTIVPIVGGGERLGTLVLARLGQEFLDDDLILAEYSSTVVGMEILREKAE
EIEEEARSKAVVQMAISSLSYSELEAIEHIFEELNGTEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGT
YIKVLNDKFLHELAKLKTN
Nucleotide
Download Length: 780 bp
>NTDB_id=33862 BAMEG_RS03665 WP_000421288.1 594654..595433(+) (codY) [Bacillus anthracis str. CDC 684]
ATGGAATTATTAGCAAAAACAAGAAAATTAAATGCGTTATTACAGAGCGCAGCAGGAAAGCCTGTAAACTTTAGAGAAAT
GTCTGACACAATGTGTGAAGTAATCGAAGCGAACGTATTCGTAGTAAGTCGTCGTGGTAAATTACTAGGTTATGCAATTC
ACCAACAAATCGAGAATGAGCGTATGAAACAAATGCTTGCAGAACGTCAATTCCCAGAAGAGTATACACAAAGCTTATTC
AACATTACAGAAACATCTTCAAACTTAGATGTAAACAGTGCTTACACAGCATTCCCAGTAGAAAATAAAGAATTATTTGG
TCAAGGTTTAACTACAATCGTACCGATCGTTGGTGGCGGTGAGCGTCTAGGTACATTAGTTTTAGCTCGTCTTGGTCAAG
AGTTCTTAGATGATGATTTAATTCTTGCTGAGTACAGCTCAACTGTTGTAGGTATGGAAATTTTACGTGAAAAAGCAGAA
GAAATCGAAGAAGAAGCACGTAGCAAAGCTGTTGTTCAAATGGCGATCAGCTCATTATCTTACAGTGAATTAGAAGCAAT
CGAGCACATCTTCGAAGAATTAAACGGAACAGAAGGTTTACTTGTTGCAAGTAAAATTGCTGACCGCGTAGGAATCACTC
GTTCGGTAATCGTAAATGCACTTCGTAAATTAGAAAGTGCTGGTGTAATTGAGTCGCGTTCTTTAGGTATGAAAGGAACA
TACATTAAAGTATTAAACGACAAATTCTTACATGAACTTGCTAAATTAAAAACAAACTAA
ATGGAATTATTAGCAAAAACAAGAAAATTAAATGCGTTATTACAGAGCGCAGCAGGAAAGCCTGTAAACTTTAGAGAAAT
GTCTGACACAATGTGTGAAGTAATCGAAGCGAACGTATTCGTAGTAAGTCGTCGTGGTAAATTACTAGGTTATGCAATTC
ACCAACAAATCGAGAATGAGCGTATGAAACAAATGCTTGCAGAACGTCAATTCCCAGAAGAGTATACACAAAGCTTATTC
AACATTACAGAAACATCTTCAAACTTAGATGTAAACAGTGCTTACACAGCATTCCCAGTAGAAAATAAAGAATTATTTGG
TCAAGGTTTAACTACAATCGTACCGATCGTTGGTGGCGGTGAGCGTCTAGGTACATTAGTTTTAGCTCGTCTTGGTCAAG
AGTTCTTAGATGATGATTTAATTCTTGCTGAGTACAGCTCAACTGTTGTAGGTATGGAAATTTTACGTGAAAAAGCAGAA
GAAATCGAAGAAGAAGCACGTAGCAAAGCTGTTGTTCAAATGGCGATCAGCTCATTATCTTACAGTGAATTAGAAGCAAT
CGAGCACATCTTCGAAGAATTAAACGGAACAGAAGGTTTACTTGTTGCAAGTAAAATTGCTGACCGCGTAGGAATCACTC
GTTCGGTAATCGTAAATGCACTTCGTAAATTAGAAAGTGCTGGTGTAATTGAGTCGCGTTCTTTAGGTATGAAAGGAACA
TACATTAAAGTATTAAACGACAAATTCTTACATGAACTTGCTAAATTAAAAACAAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| codY | Bacillus subtilis subsp. subtilis str. 168 |
81.081 |
100 |
0.811 |
| codY | Lactococcus lactis subsp. lactis strain DGCC12653 |
46.667 |
98.456 |
0.459 |