Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | EQH32_RS09640 | Genome accession | NZ_CP035248 |
| Coordinates | 1864286..1865239 (-) | Length | 317 a.a. |
| NCBI ID | WP_000345118.1 | Uniprot ID | - |
| Organism | Streptococcus pneumoniae strain TVO_1901939 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1859286..1870239
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EQH32_RS09615 (EQH32_10125) | - | 1860047..1860670 (-) | 624 | WP_000932638.1 | hypothetical protein | - |
| EQH32_RS09620 (EQH32_10130) | jag | 1860721..1861707 (-) | 987 | WP_000260014.1 | RNA-binding cell elongation regulator Jag/EloR | - |
| EQH32_RS09625 (EQH32_10135) | - | 1861726..1862550 (-) | 825 | WP_000727909.1 | membrane protein insertase YidC | - |
| EQH32_RS09630 (EQH32_10140) | rnpA | 1862525..1862896 (-) | 372 | WP_000739246.1 | ribonuclease P protein component | - |
| EQH32_RS10780 | - | 1862913..1863044 (-) | 132 | WP_000768904.1 | hypothetical protein | - |
| EQH32_RS09635 (EQH32_10145) | - | 1863045..1864235 (-) | 1191 | WP_000167769.1 | acetate kinase | - |
| EQH32_RS09640 (EQH32_10150) | comYH | 1864286..1865239 (-) | 954 | WP_000345118.1 | class I SAM-dependent methyltransferase | Machinery gene |
| EQH32_RS09645 (EQH32_10155) | - | 1865585..1866386 (+) | 802 | WP_128887635.1 | IS5 family transposase | - |
| EQH32_RS09650 (EQH32_10160) | - | 1866538..1867014 (+) | 477 | WP_000777686.1 | GNAT family N-acetyltransferase | - |
| EQH32_RS09655 (EQH32_10165) | comGG/cglG | 1867688..1868080 (-) | 393 | WP_001818966.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| EQH32_RS09660 (EQH32_10170) | comGF/cglF | 1868058..1868519 (-) | 462 | WP_000250538.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| EQH32_RS09665 (EQH32_10175) | comGE/cglE | 1868482..1868784 (-) | 303 | WP_000413382.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| EQH32_RS09670 (EQH32_10180) | comGD/cglD | 1868747..1869151 (-) | 405 | WP_000588017.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| EQH32_RS09675 (EQH32_10185) | comGC/cglC | 1869144..1869470 (-) | 327 | WP_000738625.1 | competence type IV pilus major pilin ComGC | Machinery gene |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35699.89 Da Isoelectric Point: 4.2434
>NTDB_id=337622 EQH32_RS09640 WP_000345118.1 1864286..1865239(-) (comYH) [Streptococcus pneumoniae strain TVO_1901939]
MDFEKIEQAYTYLLENVQVIQSDLATNFYDALVEQNSIYLDGETELNQVKDNNQALKRLALRKEEWLKTYQFLLMKAGQT
EPLQANHQFTPDAIALLLVFIVEELFKEEEITILEMGSGMGILGATFLISLDKKVDYLGMEVDDLLIDLAASMADVIGLQ
AGFVQGDAVRPQMLKESDVVISDLPVGYYPDDAVASRHQVASSQEHTYAHHLLMEQGLKYLKSDGYAIFLAPSDLLTSPQ
SDLLKEWLKEEASLVAMISLPENLFANAKQSKTIFILQKKSEIAVEPFVYPLASLQDASVLMKFKENFQKWTQGTEI
MDFEKIEQAYTYLLENVQVIQSDLATNFYDALVEQNSIYLDGETELNQVKDNNQALKRLALRKEEWLKTYQFLLMKAGQT
EPLQANHQFTPDAIALLLVFIVEELFKEEEITILEMGSGMGILGATFLISLDKKVDYLGMEVDDLLIDLAASMADVIGLQ
AGFVQGDAVRPQMLKESDVVISDLPVGYYPDDAVASRHQVASSQEHTYAHHLLMEQGLKYLKSDGYAIFLAPSDLLTSPQ
SDLLKEWLKEEASLVAMISLPENLFANAKQSKTIFILQKKSEIAVEPFVYPLASLQDASVLMKFKENFQKWTQGTEI
Nucleotide
Download Length: 954 bp
>NTDB_id=337622 EQH32_RS09640 WP_000345118.1 1864286..1865239(-) (comYH) [Streptococcus pneumoniae strain TVO_1901939]
ATGGATTTTGAAAAAATTGAACAAGCTTATACCTATTTACTAGAGAATGTCCAAGTCATCCAAAGTGATTTGGCGACCAA
CTTTTATGACGCCTTGGTGGAGCAAAACAGCATCTATCTGGATGGTGAAACTGAGCTAAACCAGGTCAAAGACAACAATC
AGGCCCTTAAGCGTTTAGCACTACGCAAAGAAGAATGGCTCAAGACCTACCAGTTTCTCTTGATGAAGGCTGGGCAAACA
GAACCCTTGCAGGCCAATCACCAGTTTACACCGGATGCTATTGCTTTGCTTTTGGTGTTTATTGTGGAAGAGTTGTTTAA
AGAGGAGGAAATTACTATCCTCGAAATGGGTTCTGGGATGGGAATTCTAGGCGCTACTTTCTTGATCTCGCTTGATAAAA
AGGTGGATTACTTGGGAATGGAAGTGGATGATTTGCTGATTGATCTGGCAGCTAGCATGGCAGATGTAATTGGTTTGCAG
GCTGGCTTTGTCCAAGGAGATGCCGTTCGTCCACAAATGCTCAAAGAAAGCGATGTGGTCATCAGTGACTTGCCTGTTGG
CTATTATCCTGATGATGCCGTTGCGTCGCGCCATCAAGTTGCTTCTAGCCAAGAACATACTTACGCCCATCACTTGCTCA
TGGAACAAGGGCTTAAGTACCTCAAGTCAGACGGATACGCTATTTTTCTAGCTCCGAGTGATTTGTTGACCAGTCCTCAA
AGTGATTTGTTAAAAGAATGGCTGAAAGAAGAGGCGAGTCTGGTTGCTATGATTAGTCTGCCTGAAAATCTCTTTGCTAA
TGCTAAACAATCTAAGACTATTTTTATCCTACAGAAGAAAAGTGAAATAGCAGTGGAGCCTTTTGTTTATCCACTTGCTA
GCTTGCAAGATGCAAGTGTTTTAATGAAATTTAAAGAAAATTTTCAAAAATGGACTCAAGGTACTGAAATATAA
ATGGATTTTGAAAAAATTGAACAAGCTTATACCTATTTACTAGAGAATGTCCAAGTCATCCAAAGTGATTTGGCGACCAA
CTTTTATGACGCCTTGGTGGAGCAAAACAGCATCTATCTGGATGGTGAAACTGAGCTAAACCAGGTCAAAGACAACAATC
AGGCCCTTAAGCGTTTAGCACTACGCAAAGAAGAATGGCTCAAGACCTACCAGTTTCTCTTGATGAAGGCTGGGCAAACA
GAACCCTTGCAGGCCAATCACCAGTTTACACCGGATGCTATTGCTTTGCTTTTGGTGTTTATTGTGGAAGAGTTGTTTAA
AGAGGAGGAAATTACTATCCTCGAAATGGGTTCTGGGATGGGAATTCTAGGCGCTACTTTCTTGATCTCGCTTGATAAAA
AGGTGGATTACTTGGGAATGGAAGTGGATGATTTGCTGATTGATCTGGCAGCTAGCATGGCAGATGTAATTGGTTTGCAG
GCTGGCTTTGTCCAAGGAGATGCCGTTCGTCCACAAATGCTCAAAGAAAGCGATGTGGTCATCAGTGACTTGCCTGTTGG
CTATTATCCTGATGATGCCGTTGCGTCGCGCCATCAAGTTGCTTCTAGCCAAGAACATACTTACGCCCATCACTTGCTCA
TGGAACAAGGGCTTAAGTACCTCAAGTCAGACGGATACGCTATTTTTCTAGCTCCGAGTGATTTGTTGACCAGTCCTCAA
AGTGATTTGTTAAAAGAATGGCTGAAAGAAGAGGCGAGTCTGGTTGCTATGATTAGTCTGCCTGAAAATCTCTTTGCTAA
TGCTAAACAATCTAAGACTATTTTTATCCTACAGAAGAAAAGTGAAATAGCAGTGGAGCCTTTTGTTTATCCACTTGCTA
GCTTGCAAGATGCAAGTGTTTTAATGAAATTTAAAGAAAATTTTCAAAAATGGACTCAAGGTACTGAAATATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
54.952 |
98.738 |
0.543 |
| comYH | Streptococcus mutans UA159 |
54.633 |
98.738 |
0.539 |