Detailed information
Bioinformatically predicted
Overview
| Name | amiE | Type | Regulator |
| Locus tag | FZN31_RS01335 | Genome accession | NZ_CP043414 |
| Coordinates | 285390..286394 (+) | Length | 334 a.a. |
| NCBI ID | WP_105278558.1 | Uniprot ID | - |
| Organism | Escherichia coli strain EC42405 | ||
| Function | internalize XIP (predicted from homology) Competence regulation |
||
Genomic Context
Location: 280390..291394
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FZN31_RS01315 (FZN31_01375) | dppA | 280553..282160 (+) | 1608 | WP_001222892.1 | dipeptide ABC transporter substrate-binding protein DppA | - |
| FZN31_RS01320 (FZN31_01380) | dppB | 282468..283487 (+) | 1020 | WP_000938853.1 | dipeptide ABC transporter permease DppB | - |
| FZN31_RS01325 (FZN31_01385) | dppC | 283497..284399 (+) | 903 | WP_000084677.1 | dipeptide ABC transporter permease DppC | - |
| FZN31_RS01330 (FZN31_01390) | amiE | 284410..285393 (+) | 984 | WP_105288454.1 | dipeptide ABC transporter ATP-binding protein | Regulator |
| FZN31_RS01335 (FZN31_01395) | amiE | 285390..286394 (+) | 1005 | WP_105278558.1 | dipeptide ABC transporter ATP-binding subunit DppF | Regulator |
| FZN31_RS01340 (FZN31_01400) | yhjV | 286424..287695 (-) | 1272 | WP_105288455.1 | aromatic amino acid transport family protein | - |
| FZN31_RS01345 (FZN31_01410) | - | 288171..288278 (+) | 108 | WP_001295224.1 | type I toxin-antitoxin system toxin Ldr family protein | - |
| FZN31_RS01350 (FZN31_01420) | - | 288654..288761 (+) | 108 | WP_000170738.1 | type I toxin-antitoxin system toxin Ldr family protein | - |
| FZN31_RS24840 (FZN31_01430) | - | 289138..289245 (+) | 108 | WP_000170738.1 | type I toxin-antitoxin system toxin Ldr family protein | - |
| FZN31_RS01360 (FZN31_01440) | - | 289622..289729 (+) | 108 | WP_000170738.1 | type I toxin-antitoxin system toxin Ldr family protein | - |
| FZN31_RS01365 (FZN31_01450) | - | 290105..290212 (+) | 108 | WP_000170736.1 | type I toxin-antitoxin system toxin Ldr family protein | - |
Sequence
Protein
Download Length: 334 a.a. Molecular weight: 37528.37 Da Isoelectric Point: 9.0876
>NTDB_id=336985 FZN31_RS01335 WP_105278558.1 285390..286394(+) (amiE) [Escherichia coli strain EC42405]
MSTQEATLQQPLLQAIDLKKHYPVKKGMFAPERLVKALDGVSFNLERGKTLAVVGESGCGKSTLGRLLTMIETPTGGELY
YQGQDLLKHDPQAQKLRRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTGLSKEQRREKALSMMAKVGLKTEHYDRYPH
MFSGGQRQRIAIARGLMLDPDVVIADEPVSALDVSVRAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRC
VEKGTKEQIFNNPRHPYTQALLSATPRLNPDDRRERIKLTGELPSPLNPPPGCAFNARCRRRFGPCTQLQPQLKDYGGQL
VACFAVDQDENPQR
MSTQEATLQQPLLQAIDLKKHYPVKKGMFAPERLVKALDGVSFNLERGKTLAVVGESGCGKSTLGRLLTMIETPTGGELY
YQGQDLLKHDPQAQKLRRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTGLSKEQRREKALSMMAKVGLKTEHYDRYPH
MFSGGQRQRIAIARGLMLDPDVVIADEPVSALDVSVRAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRC
VEKGTKEQIFNNPRHPYTQALLSATPRLNPDDRRERIKLTGELPSPLNPPPGCAFNARCRRRFGPCTQLQPQLKDYGGQL
VACFAVDQDENPQR
Nucleotide
Download Length: 1005 bp
>NTDB_id=336985 FZN31_RS01335 WP_105278558.1 285390..286394(+) (amiE) [Escherichia coli strain EC42405]
ATGAGTACGCAAGAGGCCACCCTGCAACAACCGCTGTTGCAGGCGATCGACCTGAAAAAACATTACCCAGTGAAGAAAGG
GATGTTTGCGCCGGAACGTCTGGTGAAGGCGCTGGACGGCGTTTCGTTTAATCTTGAACGTGGCAAGACGCTGGCAGTAG
TGGGTGAATCTGGCTGCGGTAAATCGACCCTCGGTCGGCTACTGACGATGATCGAAACACCTACCGGCGGCGAACTGTAT
TACCAGGGGCAGGATCTGCTCAAGCACGATCCGCAGGCGCAGAAGTTGCGTCGGCAGAAAATCCAGATCGTCTTCCAGAA
TCCCTATGGCTCGCTGAATCCGCGTAAAAAAGTCGGGCAAATTCTCGAAGAGCCGCTGCTGATCAACACCGGTTTAAGCA
AAGAACAGCGTCGGGAAAAAGCGTTGTCGATGATGGCGAAAGTCGGCCTGAAAACCGAGCATTACGATCGCTATCCGCAC
ATGTTCTCCGGCGGTCAGCGTCAGCGTATCGCCATCGCCCGTGGTCTGATGCTCGACCCGGATGTGGTGATTGCCGATGA
ACCGGTTTCCGCGCTGGACGTCTCGGTACGTGCGCAGGTGCTCAACCTGATGATGGATTTGCAGCAGGAACTGGGGCTGT
CTTATGTCTTTATCTCGCACGACCTGTCGGTGGTGGAACACATTGCTGATGAAGTGATGGTGATGTACCTGGGCCGCTGC
GTGGAGAAGGGGACGAAGGAGCAAATCTTCAATAATCCGCGACATCCGTACACACAGGCGCTGCTCTCCGCGACGCCGCG
CCTGAACCCGGACGACCGCCGCGAGCGCATTAAGCTCACCGGTGAACTGCCAAGCCCGCTCAATCCACCGCCGGGCTGCG
CCTTTAACGCCCGCTGTCGTCGGCGCTTCGGCCCCTGCACTCAGTTACAGCCGCAGCTAAAAGACTACGGTGGTCAACTG
GTAGCTTGTTTTGCTGTTGATCAGGATGAAAATCCGCAGCGTTAA
ATGAGTACGCAAGAGGCCACCCTGCAACAACCGCTGTTGCAGGCGATCGACCTGAAAAAACATTACCCAGTGAAGAAAGG
GATGTTTGCGCCGGAACGTCTGGTGAAGGCGCTGGACGGCGTTTCGTTTAATCTTGAACGTGGCAAGACGCTGGCAGTAG
TGGGTGAATCTGGCTGCGGTAAATCGACCCTCGGTCGGCTACTGACGATGATCGAAACACCTACCGGCGGCGAACTGTAT
TACCAGGGGCAGGATCTGCTCAAGCACGATCCGCAGGCGCAGAAGTTGCGTCGGCAGAAAATCCAGATCGTCTTCCAGAA
TCCCTATGGCTCGCTGAATCCGCGTAAAAAAGTCGGGCAAATTCTCGAAGAGCCGCTGCTGATCAACACCGGTTTAAGCA
AAGAACAGCGTCGGGAAAAAGCGTTGTCGATGATGGCGAAAGTCGGCCTGAAAACCGAGCATTACGATCGCTATCCGCAC
ATGTTCTCCGGCGGTCAGCGTCAGCGTATCGCCATCGCCCGTGGTCTGATGCTCGACCCGGATGTGGTGATTGCCGATGA
ACCGGTTTCCGCGCTGGACGTCTCGGTACGTGCGCAGGTGCTCAACCTGATGATGGATTTGCAGCAGGAACTGGGGCTGT
CTTATGTCTTTATCTCGCACGACCTGTCGGTGGTGGAACACATTGCTGATGAAGTGATGGTGATGTACCTGGGCCGCTGC
GTGGAGAAGGGGACGAAGGAGCAAATCTTCAATAATCCGCGACATCCGTACACACAGGCGCTGCTCTCCGCGACGCCGCG
CCTGAACCCGGACGACCGCCGCGAGCGCATTAAGCTCACCGGTGAACTGCCAAGCCCGCTCAATCCACCGCCGGGCTGCG
CCTTTAACGCCCGCTGTCGTCGGCGCTTCGGCCCCTGCACTCAGTTACAGCCGCAGCTAAAAGACTACGGTGGTCAACTG
GTAGCTTGTTTTGCTGTTGATCAGGATGAAAATCCGCAGCGTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| amiE | Streptococcus salivarius strain HSISS4 |
41.216 |
88.623 |
0.365 |
| amiE | Streptococcus thermophilus LMG 18311 |
40.741 |
88.922 |
0.362 |
| amiE | Streptococcus thermophilus LMD-9 |
40.741 |
88.922 |
0.362 |
| amiF | Streptococcus thermophilus LMG 18311 |
49.187 |
73.653 |
0.362 |
| amiF | Streptococcus thermophilus LMD-9 |
49.187 |
73.653 |
0.362 |
| amiF | Streptococcus salivarius strain HSISS4 |
49.187 |
73.653 |
0.362 |