Detailed information    

insolico Bioinformatically predicted

Overview


Name   mutS/mutS2   Type   Machinery gene
Locus tag   SGGBAA2069_RS09675 Genome accession   NC_015215
Coordinates   1946763..1949099 (-) Length   778 a.a.
NCBI ID   WP_013643432.1    Uniprot ID   -
Organism   Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 1941763..1954099
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SGGBAA2069_RS09650 (SGGBAA2069_c18850) trxA 1942164..1942478 (-) 315 WP_013643428.1 thioredoxin -
  SGGBAA2069_RS09655 (SGGBAA2069_c18860) - 1942738..1943235 (+) 498 WP_013643429.1 phosphatase PAP2 family protein -
  SGGBAA2069_RS09660 (SGGBAA2069_c18870) nadC 1943315..1944175 (-) 861 WP_013643430.1 carboxylating nicotinate-nucleotide diphosphorylase -
  SGGBAA2069_RS09665 (SGGBAA2069_c18880) - 1944203..1945507 (-) 1305 WP_013643431.1 L-aspartate oxidase -
  SGGBAA2069_RS09670 (SGGBAA2069_c18890) nadA 1945744..1946664 (+) 921 WP_009854932.1 quinolinate synthase NadA -
  SGGBAA2069_RS09675 (SGGBAA2069_c18900) mutS/mutS2 1946763..1949099 (-) 2337 WP_013643432.1 endonuclease MutS2 Machinery gene
  SGGBAA2069_RS09680 (SGGBAA2069_c18910) - 1949205..1949753 (-) 549 WP_013643433.1 CvpA family protein -
  SGGBAA2069_RS09685 (SGGBAA2069_c18920) zapA 1949756..1950064 (-) 309 WP_009854938.1 cell division protein ZapA -
  SGGBAA2069_RS09690 (SGGBAA2069_c18930) - 1950230..1950805 (-) 576 WP_013643434.1 TMEM175 family protein -
  SGGBAA2069_RS09695 - 1950838..1951482 (-) 645 Protein_1859 nitroreductase -
  SGGBAA2069_RS09700 (SGGBAA2069_c18960) - 1951495..1952637 (-) 1143 WP_013643437.1 NADH-dependent flavin oxidoreductase -
  SGGBAA2069_RS09705 (SGGBAA2069_c18970) - 1952772..1953140 (+) 369 WP_013643438.1 winged helix-turn-helix transcriptional regulator -

Sequence


Protein


Download         Length: 778 a.a.        Molecular weight: 87585.97 Da        Isoelectric Point: 6.3765

>NTDB_id=33647 SGGBAA2069_RS09675 WP_013643432.1 1946763..1949099(-) (mutS/mutS2) [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069]
MNNRILEQLEFDKVKQLFAGYLQTEQGQDELRKLEPMTEPDRISRSFDEMSDMEQIFIEHHSFGMGSLRDISESMRRLEL
DADVNISEIIDIKKVLQVSAEIKHFYNDLENVELSALNTLFEKIELLPSLQGSLQAINDGGFIENFASSELNRIRRQINH
DEGRVRQILQDILKKQADHLTETLIASRNGRAVLPVKNSYRNRISGVVHDISASGSTVYIEPRAVVQLNEEITQLRADER
HEMARILRELSNMLRPHTNIIRNNAWVLGHLDFVRAKFLFMQENNAIVPQLSADKTVQLLQARHPLLTNPVANDLHFLNE
LTVIVITGPNTGGKTVMLKTLGLAQLMAQSGLPILADKGSKVAVFNEIFADIGDEQSIEQSLSTFSSHMTNIVEILAAAD
KDSLVLVDELGAGTDPQEGASLAIAILEHLRLMEIKTMATTHYPELKAYGIETEFVENASMEFDTETLSPTYHFMQGVPG
RSNAFEIARRLGLAEIIVNEAERLTDSDTDVNRIIERLEEQTHESRKRLDHIKEVEQDNLKFNRAVKKLYNEFSHAKDKE
LEKASAKAQEIVDKAMAESEEILKNLHDRASLKPHEVIEAKSQLKKLAPEVDLSKNKVLKKAKKIRAPRVGDDIVVTAYG
QRGTLISQGKNGKWEAQVGLIKMTLKEDEFTLVKVQEEAQKPKKKQVNVVKKSKKSAGPRARLDLRGKRYEEAMQELDEF
IDQALLNNMAQVDIIHGIGTGVIREGVTKYLRRNKHVKSFGYAPQNAGGSGCTIANLG

Nucleotide


Download         Length: 2337 bp        

>NTDB_id=33647 SGGBAA2069_RS09675 WP_013643432.1 1946763..1949099(-) (mutS/mutS2) [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069]
ATGAACAACAGAATTTTAGAACAGTTAGAATTTGATAAAGTCAAGCAACTTTTTGCTGGCTATTTACAGACTGAGCAAGG
CCAAGACGAGTTACGTAAACTTGAGCCAATGACTGAGCCTGACCGCATTTCACGTTCTTTTGATGAAATGTCGGACATGG
AACAGATTTTCATTGAACACCATTCTTTTGGAATGGGCAGTTTGCGTGACATTTCTGAAAGTATGCGTCGCTTGGAATTG
GATGCTGACGTTAATATCTCAGAAATTATCGACATCAAGAAAGTCTTGCAAGTCTCAGCTGAAATCAAACATTTTTATAA
TGATTTGGAAAATGTAGAGTTGTCTGCATTAAATACTCTTTTTGAGAAGATTGAATTGTTGCCAAGTCTGCAAGGTAGCT
TACAAGCGATTAATGACGGTGGTTTCATTGAAAATTTTGCAAGTTCAGAATTGAACCGTATTCGTCGCCAAATCAATCAT
GACGAAGGTAGAGTTCGTCAAATTTTGCAGGATATTTTGAAAAAACAAGCTGATCATTTGACAGAGACTCTGATTGCTAG
TCGTAATGGTCGTGCGGTTTTGCCTGTGAAAAATAGCTACCGCAACCGTATTTCAGGGGTTGTGCATGATATTTCGGCAT
CAGGAAGTACGGTTTACATTGAACCGCGCGCAGTAGTGCAACTTAATGAAGAAATCACGCAATTGCGAGCAGATGAACGT
CACGAAATGGCACGTATTTTACGTGAATTGTCAAATATGCTTCGCCCACATACTAATATTATTCGTAACAATGCGTGGGT
TTTAGGGCATTTGGATTTTGTTCGTGCTAAGTTCCTCTTCATGCAGGAAAACAACGCAATCGTGCCACAATTATCAGCAG
ATAAAACCGTGCAACTATTGCAAGCTCGCCACCCGCTTTTGACCAATCCAGTTGCCAATGACCTTCATTTTCTTAACGAA
TTGACCGTTATTGTTATTACAGGACCAAATACTGGTGGTAAGACAGTCATGTTGAAAACATTGGGCTTAGCGCAGCTTAT
GGCACAATCAGGTTTGCCAATCTTGGCTGACAAAGGTAGTAAAGTTGCCGTATTTAATGAGATTTTTGCAGATATTGGCG
ATGAGCAATCTATCGAACAAAGTTTGTCAACATTTTCAAGTCATATGACAAATATTGTTGAGATTTTGGCAGCGGCGGAT
AAAGATAGTCTTGTCTTGGTCGATGAATTGGGAGCAGGAACTGACCCACAAGAAGGTGCCAGTCTTGCGATTGCCATTCT
TGAACACCTTCGCCTCATGGAAATTAAAACCATGGCAACGACACATTATCCAGAATTGAAAGCTTACGGTATTGAGACAG
AATTTGTGGAAAATGCCAGCATGGAATTTGATACAGAGACGTTAAGTCCAACTTATCATTTTATGCAAGGTGTACCAGGG
CGCTCCAATGCCTTTGAAATTGCTCGTCGTCTTGGTTTAGCAGAGATTATTGTCAATGAAGCAGAGCGTTTGACGGACTC
TGATACGGATGTTAACCGCATCATCGAGCGTTTGGAAGAACAAACCCATGAAAGTCGTAAACGACTTGACCATATCAAAG
AAGTGGAACAAGATAACCTCAAATTCAACCGTGCGGTCAAGAAACTTTACAACGAATTTTCACATGCCAAGGACAAAGAA
CTTGAAAAAGCTAGCGCCAAAGCGCAAGAAATTGTGGATAAAGCCATGGCAGAGAGTGAAGAAATTCTCAAAAATCTTCA
TGATAGAGCAAGCCTTAAACCGCATGAAGTTATTGAAGCCAAAAGTCAGCTGAAAAAATTGGCACCTGAAGTTGATTTGT
CGAAAAATAAAGTCCTCAAGAAAGCTAAAAAAATACGCGCACCGCGCGTGGGTGATGACATTGTCGTCACAGCCTACGGA
CAACGTGGAACCTTGATTAGCCAAGGGAAAAACGGAAAATGGGAAGCGCAAGTTGGTCTTATTAAAATGACACTTAAAGA
GGACGAATTTACCCTTGTTAAAGTTCAAGAGGAAGCCCAAAAGCCGAAGAAAAAACAAGTCAATGTGGTCAAGAAAAGCA
AAAAATCAGCTGGTCCACGTGCCCGCCTTGATCTTCGTGGTAAACGCTATGAAGAGGCTATGCAAGAATTGGATGAATTT
ATCGACCAAGCCTTGCTAAATAACATGGCACAAGTCGATATTATTCACGGTATCGGAACAGGTGTTATCCGTGAAGGTGT
CACAAAATACCTTCGTCGCAACAAACACGTCAAATCATTTGGTTATGCCCCACAAAACGCAGGTGGCAGCGGCTGCACTA
TTGCAAATCTAGGGTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

41.013

100

0.416


Multiple sequence alignment