Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | EQZ01_RS12820 | Genome accession | NZ_CP035231 |
| Coordinates | 2456703..2457740 (-) | Length | 345 a.a. |
| NCBI ID | WP_128738021.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain SRCM103571 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2451703..2462740
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EQZ01_RS12770 (EQZ01_12770) | tasA | 2451800..2452585 (-) | 786 | WP_128738018.1 | biofilm matrix protein TasA | - |
| EQZ01_RS12775 (EQZ01_12775) | sipW | 2452649..2453221 (-) | 573 | WP_128738626.1 | signal peptidase I SipW | - |
| EQZ01_RS12780 (EQZ01_12780) | tapA | 2453205..2453966 (-) | 762 | WP_101169542.1 | amyloid fiber anchoring/assembly protein TapA | - |
| EQZ01_RS12785 (EQZ01_12785) | yqzG | 2454239..2454565 (+) | 327 | WP_024573388.1 | YqzG/YhdC family protein | - |
| EQZ01_RS12790 (EQZ01_12790) | spoIITA | 2454607..2454786 (-) | 180 | WP_014480252.1 | YqzE family protein | - |
| EQZ01_RS12795 (EQZ01_12795) | comGG | 2454857..2455231 (-) | 375 | WP_014480253.1 | ComG operon protein ComGG | Machinery gene |
| EQZ01_RS12800 (EQZ01_12800) | comGF | 2455232..2455615 (-) | 384 | WP_128738019.1 | ComG operon protein ComGF | Machinery gene |
| EQZ01_RS12805 (EQZ01_12805) | comGE | 2455641..2455988 (-) | 348 | WP_128738020.1 | ComG operon protein 5 | Machinery gene |
| EQZ01_RS12810 (EQZ01_12810) | comGD | 2455972..2456403 (-) | 432 | WP_024573390.1 | comG operon protein ComGD | Machinery gene |
| EQZ01_RS12815 (EQZ01_12815) | comGC | 2456393..2456689 (-) | 297 | WP_024573391.1 | comG operon protein ComGC | Machinery gene |
| EQZ01_RS12820 (EQZ01_12820) | comGB | 2456703..2457740 (-) | 1038 | WP_128738021.1 | comG operon protein ComGB | Machinery gene |
| EQZ01_RS12825 (EQZ01_12825) | comGA | 2457727..2458797 (-) | 1071 | WP_128738022.1 | competence protein ComGA | Machinery gene |
| EQZ01_RS22000 (EQZ01_12830) | - | 2459008..2459133 (-) | 126 | WP_003230155.1 | hypothetical protein | - |
| EQZ01_RS12835 (EQZ01_12835) | corA | 2459199..2460152 (-) | 954 | WP_004399136.1 | magnesium transporter CorA | - |
| EQZ01_RS12840 (EQZ01_12840) | yqhB | 2460295..2461623 (+) | 1329 | WP_003230150.1 | hemolysin family protein | - |
| EQZ01_RS12845 (EQZ01_12845) | rsbRD | 2461676..2462512 (-) | 837 | WP_015384093.1 | RsbT co-antagonist protein RsbRD | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39836.29 Da Isoelectric Point: 9.6026
>NTDB_id=336464 EQZ01_RS12820 WP_128738021.1 2456703..2457740(-) (comGB) [Bacillus subtilis strain SRCM103571]
MKKIRKIWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDTVTCLREGTPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKYQT
FLPFYRCEAEQLIERLKAGESIEAAICGSPFYETDFSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLLPMYQMMNQM
MKKIRKIWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDTVTCLREGTPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKYQT
FLPFYRCEAEQLIERLKAGESIEAAICGSPFYETDFSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLLPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=336464 EQZ01_RS12820 WP_128738021.1 2456703..2457740(-) (comGB) [Bacillus subtilis strain SRCM103571]
ATGAAAAAGATTAGAAAAATCTGGTCATTAAAGGATCAAGCCAGGTTATTAAAGCGGCTCGGTGAAATGACTGCGGGGGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATACGGTCA
CTTGTTTGAGGGAAGGGACTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTAAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAATATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAAGCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTTTCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGAGAGCTTT
TCACATACAGCCAGTTCATATTGCAGCGGCTGGAACACAAGGCGCAAAAATGGACAGGCATCCTTCAGCCGATGATTTAT
GGATTTGTTGCTGCAATGATCTTACTTGTGTATTTATCTATGCTCTTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAATCTGGTCATTAAAGGATCAAGCCAGGTTATTAAAGCGGCTCGGTGAAATGACTGCGGGGGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATACGGTCA
CTTGTTTGAGGGAAGGGACTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTAAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAATATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAAGCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTTTCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGAGAGCTTT
TCACATACAGCCAGTTCATATTGCAGCGGCTGGAACACAAGGCGCAAAAATGGACAGGCATCCTTCAGCCGATGATTTAT
GGATTTGTTGCTGCAATGATCTTACTTGTGTATTTATCTATGCTCTTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
97.833 |
93.623 |
0.916 |