Detailed information NTG0336323

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: EQY74_RS20400
• Genome accession: NZ_CP035228
• Coordinates: 3827870..3828604 (-)
• Length: 244 a.a.
• NCBI ID: WP_011198352.1
• Uniprot ID: A0A415J866
• Organism: Bacillus licheniformis strain SRCM103529
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3822870..3833604

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQY74_RS20365 (EQY74_20365)	fliW	3823021..3823452 (-)	432	WP_011198351.1	flagellar assembly protein FliW	-
EQY74_RS20370 (EQY74_20370)	-	3823474..3824040 (-)	567	WP_009329670.1	DUF6470 family protein	-
EQY74_RS20375 (EQY74_20375)	flgL	3824090..3825001 (-)	912	WP_003185705.1	flagellar hook-associated protein FlgL	-
EQY74_RS20380 (EQY74_20380)	flgK	3825012..3826535 (-)	1524	WP_003185709.1	flagellar hook-associated protein FlgK	-
EQY74_RS20385 (EQY74_20385)	-	3826551..3827027 (-)	477	WP_003185711.1	flagellar protein FlgN	-
EQY74_RS20390 (EQY74_20390)	flgM	3827046..3827312 (-)	267	WP_003185713.1	flagellar biosynthesis anti-sigma factor FlgM	-
EQY74_RS20395 (EQY74_20395)	-	3827392..3827811 (-)	420	WP_003185715.1	TIGR03826 family flagellar region protein	-
EQY74_RS20400 (EQY74_20400)	comFC	3827870..3828604 (-)	735	WP_011198352.1	amidophosphoribosyltransferase	Machinery gene
EQY74_RS20405 (EQY74_20405)	-	3828561..3828845 (-)	285	WP_003185718.1	competence protein ComFB	-
EQY74_RS20410 (EQY74_20410)	comFA	3828900..3830294 (-)	1395	WP_003185720.1	DEAD/DEAH box helicase	Machinery gene
EQY74_RS20415 (EQY74_20415)	-	3830415..3831257 (-)	843	WP_003185726.1	DegV family protein	-
EQY74_RS20420 (EQY74_20420)	degU	3831377..3832066 (-)	690	WP_003185730.1	two-component system response regulator DegU	Regulator
EQY74_RS20425 (EQY74_20425)	degS	3832148..3833305 (-)	1158	WP_003185733.1	histidine kinase	Regulator

Sequence

Protein

• Length: 244 a.a.
• Molecular weight: 27811.22 Da
• Isoelectric Point: 9.4827

>NTDB_id=336323 EQY74_RS20400 WP_011198352.1 3827870..3828604(-) (comFC) [Bacillus licheniformis strain SRCM103529]
MKTRFAQAIEEGGNKLNCLICAAPLLHSLSWHSFFFLRSEEKICRECKENFIEIKGTVCPKCGRPQGSEELCGDCAKWEA
NPLTRSLLRQNRSVYLYNTFMKEVLARFKFRGDAELVFAFAPSFISAFQQYFRRSPSVLVPIPLSEERKAERGFNQAERL
ASLLQIPVIHPLIRIENEKQSKKSRKERIKPKTVFRTEKGSVKNLDVILIDDLYTTGATLHHAADCLMTSGEAKSVSSYT
LIRS

Nucleotide

• Length: 735 bp

>NTDB_id=336323 EQY74_RS20400 WP_011198352.1 3827870..3828604(-) (comFC) [Bacillus licheniformis strain SRCM103529]
ATGAAAACCCGCTTTGCGCAAGCAATCGAAGAGGGAGGGAATAAACTGAATTGTTTAATTTGTGCAGCGCCTCTTTTACA
TTCTCTCTCATGGCATTCTTTTTTCTTTTTACGATCAGAAGAGAAAATATGCAGGGAATGTAAAGAGAACTTTATCGAGA
TCAAAGGAACCGTATGCCCTAAGTGCGGACGGCCACAGGGGAGCGAAGAGCTGTGCGGTGACTGCGCAAAATGGGAGGCC
AATCCGTTAACCCGCTCTCTTTTGAGGCAAAACCGCTCTGTTTATCTCTACAATACTTTCATGAAAGAAGTCCTTGCCCG
TTTTAAGTTCAGAGGTGATGCTGAACTGGTCTTCGCTTTTGCCCCTTCATTTATCAGCGCTTTTCAACAATACTTCCGCC
GCAGCCCGTCTGTTTTAGTTCCGATACCTCTCAGTGAAGAACGTAAAGCGGAGAGGGGATTTAATCAGGCGGAGCGTCTT
GCTTCCTTATTACAAATACCCGTTATTCATCCCTTGATCAGAATCGAAAATGAAAAACAATCCAAAAAAAGCAGGAAAGA
GCGAATTAAGCCAAAAACCGTTTTTAGAACCGAAAAGGGGTCAGTAAAGAATCTGGATGTCATATTGATTGACGACTTGT
ATACGACAGGAGCGACCCTTCATCATGCCGCTGATTGCCTGATGACATCCGGAGAAGCAAAATCTGTATCATCATATACA
TTAATTAGAAGCTAA

Domains

Predicted by InterproScan.

• Phosphoribosyl transferase domain (Pribosyltran) (151-242)

• Double zinc ribbon domain (DZR_2) (17-76)

3D structure

• AlphaFold DB: A0A415J866

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	52.321	97.131	0.508