Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | EQJ84_RS12255 | Genome accession | NZ_CP035191 |
| Coordinates | 2396860..2397897 (-) | Length | 345 a.a. |
| NCBI ID | WP_077671432.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain SRCM104011 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2391860..2402897
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EQJ84_RS12205 (EQJ84_12205) | tasA | 2391956..2392741 (-) | 786 | WP_014477324.1 | biofilm matrix protein TasA | - |
| EQJ84_RS12210 (EQJ84_12210) | sipW | 2392806..2393378 (-) | 573 | WP_077671469.1 | signal peptidase I SipW | - |
| EQJ84_RS12215 (EQJ84_12215) | tapA | 2393362..2394123 (-) | 762 | WP_032726156.1 | amyloid fiber anchoring/assembly protein TapA | - |
| EQJ84_RS12220 (EQJ84_12220) | yqzG | 2394395..2394721 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| EQJ84_RS12225 (EQJ84_12225) | spoIITA | 2394763..2394942 (-) | 180 | WP_014480252.1 | YqzE family protein | - |
| EQJ84_RS12230 (EQJ84_12230) | comGG | 2395014..2395388 (-) | 375 | WP_032726157.1 | ComG operon protein ComGG | Machinery gene |
| EQJ84_RS12235 (EQJ84_12235) | comGF | 2395389..2395772 (-) | 384 | WP_032726158.1 | ComG operon protein ComGF | Machinery gene |
| EQJ84_RS12240 (EQJ84_12240) | comGE | 2395798..2396145 (-) | 348 | WP_021480020.1 | ComG operon protein 5 | Machinery gene |
| EQJ84_RS12245 (EQJ84_12245) | comGD | 2396129..2396560 (-) | 432 | WP_038829732.1 | comG operon protein ComGD | Machinery gene |
| EQJ84_RS12250 (EQJ84_12250) | comGC | 2396550..2396846 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| EQJ84_RS12255 (EQJ84_12255) | comGB | 2396860..2397897 (-) | 1038 | WP_077671432.1 | comG operon protein ComGB | Machinery gene |
| EQJ84_RS12260 (EQJ84_12260) | comGA | 2397884..2398954 (-) | 1071 | WP_070547533.1 | competence protein ComGA | Machinery gene |
| EQJ84_RS12265 (EQJ84_12265) | - | 2399182..2399364 (-) | 183 | WP_033884706.1 | hypothetical protein | - |
| EQJ84_RS12270 (EQJ84_12270) | corA | 2399366..2400319 (-) | 954 | WP_004399136.1 | magnesium transporter CorA | - |
| EQJ84_RS12275 (EQJ84_12275) | yqhB | 2400462..2401790 (+) | 1329 | WP_003230150.1 | hemolysin family protein | - |
| EQJ84_RS12280 (EQJ84_12280) | rsbRD | 2401843..2402679 (-) | 837 | WP_021480027.1 | RsbT co-antagonist protein RsbRD | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39665.05 Da Isoelectric Point: 9.5258
>NTDB_id=335905 EQJ84_RS12255 WP_077671432.1 2396860..2397897(-) (comGB) [Bacillus subtilis strain SRCM104011]
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDTVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLSYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDTVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLSYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=335905 EQJ84_RS12255 WP_077671432.1 2396860..2397897(-) (comGB) [Bacillus subtilis strain SRCM104011]
ATGAAAAAGATTAGAAAAGTCTGGTCATTAAAGGATCAAGCCAGGTTATTAAAGCGGCTCGGTGAAATGACTGCGGGGGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATACGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGAGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTCATTAAAGGATCAAGCCAGGTTATTAAAGCGGCTCGGTGAAATGACTGCGGGGGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATACGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGAGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
99.071 |
93.623 |
0.928 |