Detailed information NTG0335720

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: EQ841_RS10245
• Genome accession: NZ_CP035186
• Coordinates: 2140951..2141652 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain 11A1213CRGN008
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2135951..2146652

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQ841_RS10215 (EQ841_10215)	-	2136257..2136700 (-)	444	WP_001246675.1	SRPBCC family protein	-
EQ841_RS10220 (EQ841_10220)	tadA	2136770..2137273 (-)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
EQ841_RS10225 (EQ841_10225)	-	2137280..2138404 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
EQ841_RS10230 (EQ841_10230)	ung	2138401..2139114 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
EQ841_RS10235 (EQ841_10235)	-	2139165..2139761 (-)	597	WP_000908452.1	6-pyruvoyl trahydropterin synthase family protein	-
EQ841_RS10240 (EQ841_10240)	gspK	2139992..2140951 (-)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
EQ841_RS10245 (EQ841_10245)	xcpW	2140951..2141652 (-)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
EQ841_RS10250 (EQ841_10250)	xcpV	2141652..2142032 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
EQ841_RS10255 (EQ841_10255)	-	2142022..2142576 (-)	555	WP_000841373.1	type II secretion system protein	-
EQ841_RS10260 (EQ841_10260)	-	2142586..2143194 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
EQ841_RS10265 (EQ841_10265)	-	2143232..2144005 (-)	774	WP_000497298.1	TatD family hydrolase	-
EQ841_RS10270 (EQ841_10270)	-	2144023..2144364 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
EQ841_RS10275 (EQ841_10275)	-	2144376..2145356 (-)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
EQ841_RS10280 (EQ841_10280)	kdsB	2145368..2146129 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=335720 EQ841_RS10245 WP_000594589.1 2140951..2141652(-) (xcpW) [Acinetobacter baumannii strain 11A1213CRGN008]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=335720 EQ841_RS10245 WP_000594589.1 2140951..2141652(-) (xcpW) [Acinetobacter baumannii strain 11A1213CRGN008]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996