Detailed information NTG0334128

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: EP550_RS08520
• Genome accession: NZ_CP035043
• Coordinates: 1776072..1776773 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain ABUH796
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1771072..1781773

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EP550_RS08485 (EP550_08485)	kdsB	1771595..1772356 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
EP550_RS08490 (EP550_08490)	-	1772368..1773348 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
EP550_RS08495 (EP550_08495)	-	1773360..1773701 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
EP550_RS08500 (EP550_08500)	-	1773719..1774492 (+)	774	WP_000497298.1	TatD family hydrolase	-
EP550_RS08505 (EP550_08505)	-	1774530..1775138 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
EP550_RS08510 (EP550_08510)	-	1775148..1775702 (+)	555	WP_000841373.1	type II secretion system protein	-
EP550_RS08515 (EP550_08515)	xcpV	1775692..1776072 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
EP550_RS08520 (EP550_08520)	xcpW	1776072..1776773 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
EP550_RS08525 (EP550_08525)	gspK	1776773..1777732 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
EP550_RS08530 (EP550_08530)	-	1777963..1778559 (+)	597	WP_000908452.1	6-pyruvoyl trahydropterin synthase family protein	-
EP550_RS08535 (EP550_08535)	ung	1778610..1779323 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
EP550_RS08540 (EP550_08540)	-	1779320..1780444 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
EP550_RS08545 (EP550_08545)	tadA	1780451..1780954 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
EP550_RS08550 (EP550_08550)	-	1781024..1781467 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=334128 EP550_RS08520 WP_000594589.1 1776072..1776773(+) (xcpW) [Acinetobacter baumannii strain ABUH796]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=334128 EP550_RS08520 WP_000594589.1 1776072..1776773(+) (xcpW) [Acinetobacter baumannii strain ABUH796]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996