Detailed information
Bioinformatically predicted
Overview
| Name | comQ | Type | Machinery gene |
| Locus tag | FWK45_RS01470 | Genome accession | NZ_CP043001 |
| Coordinates | 283737..284054 (+) | Length | 105 a.a. |
| NCBI ID | WP_012340547.1 | Uniprot ID | A0A9Q6K6P7 |
| Organism | Histophilus somni strain UOC-KLM-ATR-04 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 278737..289054
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FWK45_RS01430 (FWK45_01430) | tolB | 279377..280681 (+) | 1305 | WP_075320971.1 | Tol-Pal system beta propeller repeat protein TolB | - |
| FWK45_RS01435 (FWK45_01435) | pal | 280691..281146 (+) | 456 | WP_041603993.1 | peptidoglycan-associated lipoprotein Pal | - |
| FWK45_RS01455 (FWK45_01455) | comN | 281820..282347 (+) | 528 | WP_011608418.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| FWK45_RS01460 (FWK45_01460) | comO | 282396..283073 (+) | 678 | WP_011608419.1 | type II secretion system protein J | Machinery gene |
| FWK45_RS01465 (FWK45_01465) | comP | 283076..283756 (+) | 681 | WP_132995094.1 | DUF2572 family protein | Machinery gene |
| FWK45_RS01470 (FWK45_01470) | comQ | 283737..284054 (+) | 318 | WP_012340547.1 | DUF5374 domain-containing protein | Machinery gene |
| FWK45_RS01475 (FWK45_01475) | recC | 284107..287541 (+) | 3435 | WP_132995096.1 | exodeoxyribonuclease V subunit gamma | - |
| FWK45_RS01480 (FWK45_01480) | ruvA | 287620..288234 (+) | 615 | WP_075293664.1 | Holliday junction branch migration protein RuvA | Machinery gene |
Sequence
Protein
Download Length: 105 a.a. Molecular weight: 12552.55 Da Isoelectric Point: 9.7112
>NTDB_id=334032 FWK45_RS01470 WP_012340547.1 283737..284054(+) (comQ) [Histophilus somni strain UOC-KLM-ATR-04]
MIFNHYKFPQRGTSLITLLVTMMIFSTLFLFVNQWVSYQRKSAVNIYLRYQALQIAENQHQRLFLEPHFHCPHNIEQNGY
KFKINCEGKNVRVSYANQQVNLLLD
MIFNHYKFPQRGTSLITLLVTMMIFSTLFLFVNQWVSYQRKSAVNIYLRYQALQIAENQHQRLFLEPHFHCPHNIEQNGY
KFKINCEGKNVRVSYANQQVNLLLD
Nucleotide
Download Length: 318 bp
>NTDB_id=334032 FWK45_RS01470 WP_012340547.1 283737..284054(+) (comQ) [Histophilus somni strain UOC-KLM-ATR-04]
ATGATTTTCAACCATTATAAATTTCCTCAACGGGGTACCAGCTTGATCACGTTATTAGTCACAATGATGATATTTTCTAC
ATTATTTTTATTTGTTAATCAATGGGTTAGTTATCAAAGAAAAAGTGCGGTAAATATTTATCTACGTTATCAAGCTTTGC
AAATCGCTGAAAATCAACATCAACGCTTATTTCTAGAACCGCATTTTCATTGTCCGCATAATATCGAGCAAAACGGTTAT
AAGTTTAAGATCAATTGTGAAGGTAAGAATGTACGAGTTTCTTATGCAAATCAACAAGTAAATTTATTGCTTGATTAA
ATGATTTTCAACCATTATAAATTTCCTCAACGGGGTACCAGCTTGATCACGTTATTAGTCACAATGATGATATTTTCTAC
ATTATTTTTATTTGTTAATCAATGGGTTAGTTATCAAAGAAAAAGTGCGGTAAATATTTATCTACGTTATCAAGCTTTGC
AAATCGCTGAAAATCAACATCAACGCTTATTTCTAGAACCGCATTTTCATTGTCCGCATAATATCGAGCAAAACGGTTAT
AAGTTTAAGATCAATTGTGAAGGTAAGAATGTACGAGTTTCTTATGCAAATCAACAAGTAAATTTATTGCTTGATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comQ | Haemophilus influenzae Rd KW20 |
46.667 |
85.714 |
0.4 |