Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   FGL73_RS10280 Genome accession   NZ_CP042408
Coordinates   2118715..2120592 (+) Length   625 a.a.
NCBI ID   WP_146978358.1    Uniprot ID   -
Organism   Lactococcus lactis strain CBA3619     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2113715..2125592
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL73_RS10260 (FGL73_10260) - 2113915..2115189 (-) 1275 WP_098393113.1 NAD(P)/FAD-dependent oxidoreductase -
  FGL73_RS10265 (FGL73_10265) - 2115331..2116158 (+) 828 WP_098393114.1 NAD(P)H-hydrate dehydratase -
  FGL73_RS10270 (FGL73_10270) - 2116309..2116722 (+) 414 WP_038598863.1 DUF1398 domain-containing protein -
  FGL73_RS10275 (FGL73_10275) - 2116883..2118718 (+) 1836 WP_146978357.1 ABC transporter ATP-binding protein -
  FGL73_RS10280 (FGL73_10280) rcrQ 2118715..2120592 (+) 1878 WP_146978358.1 ABC transporter ATP-binding protein Regulator
  FGL73_RS10285 (FGL73_10285) - 2120691..2121344 (+) 654 WP_038598871.1 YcjF family protein -
  FGL73_RS10290 (FGL73_10290) - 2121390..2122409 (-) 1020 WP_104142867.1 Gfo/Idh/MocA family oxidoreductase -
  FGL73_RS12620 - 2122393..2122560 (-) 168 WP_003131184.1 hypothetical protein -
  FGL73_RS10295 (FGL73_10295) - 2122749..2123225 (-) 477 WP_003131187.1 S-ribosylhomocysteine lyase -
  FGL73_RS10300 (FGL73_10300) - 2123439..2123903 (+) 465 WP_104142870.1 GyrI-like domain-containing protein -
  FGL73_RS10305 (FGL73_10305) - 2123968..2124813 (+) 846 WP_003131189.1 aldo/keto reductase -
  FGL73_RS10310 (FGL73_10310) - 2124979..2125491 (+) 513 WP_023189990.1 cysteine hydrolase family protein -

Sequence

Protein


Download         Length: 625 a.a.        Molecular weight: 70293.12 Da        Isoelectric Point: 8.7560

>NTDB_id=331627 FGL73_RS10280 WP_146978358.1 2118715..2120592(+) (rcrQ) [Lactococcus lactis strain CBA3619]
MMRGNYLNRGGKGAGRFQKGRRAQNFFPTIIRLFKYMRRDLWGLLFSILIASLSVILSVQAPKILGNATTVIFDGVTKSL
KNHTAIQIDMAKVESILLYVMVIYLISFISGILQQSIMTRISQRTVYTLRREFKNKMKKLPVSYYDSHSHGDIMSRMIND
MDNISGTLNQTLIQLITSLLQFVGTIYFMLTISWQLALVAFITVPLAMITVRIVAPLSQKFFAEQQKNLGLLNDQIEENY
AGHTVIKTFNHEASAEKEFAKRNDNFYKSAWKAQFVSTLIYPTMRFINNLDYLAMAVIGGLKVISGTVNLGDVQAMLQYT
NQFAQPITNISNMLNTIQATVASAERIFEVLDEKEMTDGIPVSEKVADKSSKNAVSNLEATDKTDFINFDQVAFSYNENQ
SLMTDVNFSVEVGQMIAIVGPTGAGKTTMINLLERFYDVTSGNILLEGKDIREIDREQLRGRMAMVLQETWLFSGTIMDN
LQYGRLEATQEEVIQAAKMAHADEFITTLPQGYQTLLNEAASNISQGQRQLLTIARAFLANPEILILDEATSSVDTRTER
LIQSAMNRLLKGRTSFVVAHRLSTIRDANQILVMENGNIVEMGNHESLLKENGLYASLYNSQFAK

Nucleotide


Download         Length: 1878 bp        

>NTDB_id=331627 FGL73_RS10280 WP_146978358.1 2118715..2120592(+) (rcrQ) [Lactococcus lactis strain CBA3619]
ATGATGAGAGGAAATTATCTCAATCGAGGTGGCAAAGGGGCTGGCCGTTTTCAAAAAGGTCGGCGAGCTCAAAATTTCTT
TCCAACGATTATTCGACTGTTCAAATATATGCGCAGAGATTTATGGGGACTCCTTTTTTCAATTTTAATTGCTTCGCTGT
CAGTCATTTTGTCGGTTCAGGCACCCAAAATTTTGGGAAATGCAACCACAGTGATATTTGATGGCGTAACAAAAAGTCTA
AAAAATCATACCGCAATTCAAATTGACATGGCTAAGGTCGAATCTATTTTGCTTTATGTCATGGTCATTTATCTGATTTC
ATTTATCTCTGGGATTTTGCAACAAAGCATTATGACACGCATTTCGCAACGAACAGTTTATACTTTACGTCGTGAATTTA
AAAACAAAATGAAAAAATTGCCAGTTTCATATTATGATAGCCATAGTCATGGGGATATCATGAGTCGAATGATAAATGAT
ATGGATAATATTTCAGGGACTTTAAATCAAACTTTGATTCAGCTAATCACAAGTCTTTTGCAATTTGTTGGAACTATTTA
TTTCATGTTGACCATTTCTTGGCAGTTGGCACTCGTCGCCTTTATCACAGTTCCTTTGGCAATGATTACGGTAAGGATTG
TCGCACCTTTATCGCAAAAATTCTTTGCTGAACAACAAAAAAATCTGGGATTATTGAATGACCAAATTGAAGAAAATTAT
GCAGGGCATACGGTCATTAAAACATTTAATCATGAAGCCTCAGCTGAAAAAGAATTTGCAAAAAGAAATGATAATTTTTA
TAAATCAGCTTGGAAAGCTCAATTTGTATCGACTTTGATTTATCCAACCATGCGATTTATCAATAATTTAGATTACTTAG
CCATGGCCGTAATTGGTGGTCTTAAAGTTATTTCAGGGACGGTTAATCTCGGAGATGTTCAAGCCATGTTGCAATATACC
AATCAATTTGCACAGCCAATCACAAATATCTCGAATATGCTTAATACTATTCAGGCTACAGTTGCGTCAGCCGAACGAAT
TTTTGAAGTATTAGATGAAAAAGAAATGACTGACGGAATTCCTGTCAGTGAAAAAGTTGCTGACAAAAGTTCAAAAAATG
CTGTCAGTAATTTAGAAGCGACTGACAAGACTGATTTCATCAATTTTGACCAAGTTGCATTTTCTTACAATGAGAATCAA
TCCTTAATGACAGATGTAAATTTTTCCGTTGAAGTTGGGCAAATGATTGCCATTGTGGGACCAACAGGAGCAGGAAAAAC
AACAATGATTAACTTGCTCGAACGATTTTACGATGTCACTTCGGGAAATATTTTACTTGAGGGAAAAGACATTCGCGAAA
TTGACCGTGAACAATTACGTGGACGGATGGCAATGGTTTTACAAGAAACCTGGTTGTTCTCAGGGACAATTATGGATAAT
TTACAGTATGGTCGTCTTGAAGCAACACAAGAAGAAGTGATTCAAGCAGCTAAAATGGCACATGCTGATGAATTTATCAC
CACTTTACCTCAAGGTTATCAAACTCTTTTGAATGAAGCCGCAAGCAATATTTCTCAGGGTCAAAGGCAGTTATTAACCA
TCGCCCGTGCCTTTTTAGCAAATCCAGAAATATTGATTTTGGATGAAGCCACCTCCAGTGTAGATACAAGAACGGAGCGC
CTGATTCAATCAGCGATGAATCGTTTATTAAAAGGGCGGACAAGCTTTGTTGTTGCTCACCGCTTATCAACTATTCGTGA
TGCCAATCAGATTTTGGTTATGGAAAATGGAAATATTGTGGAAATGGGAAACCATGAAAGTCTCCTTAAAGAAAATGGAT
TATATGCCAGCCTTTATAATTCACAATTTGCAAAATAA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(44-326)

ABC transporter (ABC_tran)

(404-552)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

40.641

94.88

0.386

Multiple sequence alignment