Detailed information NTG0331582

Bioinformatically predicted

Overview

• Name: recD/recD2/recDB
• Type: Machinery gene
• Locus tag: FGL73_RS06100
• Genome accession: NZ_CP042408
• Coordinates: 1301993..1304497 (-)
• Length: 834 a.a.
• NCBI ID: WP_104141503.1
• Uniprot ID: -
• Organism: Lactococcus lactis strain CBA3619
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1296993..1309497

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FGL73_RS06075 (FGL73_06075)	-	1298168..1298851 (+)	684	WP_003130398.1	lactate utilization protein C	-
FGL73_RS06080 (FGL73_06080)	-	1298926..1299639 (-)	714	WP_081043194.1	Bax inhibitor-1/YccA family protein	-
FGL73_RS06085 (FGL73_06085)	-	1299756..1300667 (-)	912	WP_104141504.1	diacylglycerol kinase family protein	-
FGL73_RS06090 (FGL73_06090)	-	1300822..1301334 (-)	513	WP_003132795.1	HD domain-containing protein	-
FGL73_RS06095 (FGL73_06095)	rpsT	1301667..1301900 (+)	234	WP_038601748.1	30S ribosomal protein S20	-
FGL73_RS06100 (FGL73_06100)	recD/recD2/recDB	1301993..1304497 (-)	2505	WP_104141503.1	ATP-dependent RecD-like DNA helicase	Machinery gene
FGL73_RS06105 (FGL73_06105)	-	1304494..1305087 (-)	594	WP_098393308.1	histidine phosphatase family protein	-
FGL73_RS06110 (FGL73_06110)	pheA	1305090..1305929 (-)	840	WP_014570689.1	prephenate dehydratase	-
FGL73_RS06115 (FGL73_06115)	-	1305931..1306419 (-)	489	WP_038601758.1	shikimate kinase	-
FGL73_RS06120 (FGL73_06120)	aroA	1306443..1307735 (-)	1293	WP_058205174.1	3-phosphoshikimate 1-carboxyvinyltransferase	-
FGL73_RS06125 (FGL73_06125)	-	1307856..1308920 (-)	1065	WP_058205175.1	prephenate dehydrogenase	-

Sequence

Protein

• Length: 834 a.a.
• Molecular weight: 92963.36 Da
• Isoelectric Point: 4.5229

>NTDB_id=331582 FGL73_RS06100 WP_104141503.1 1301993..1304497(-) (recD/recD2/recDB) [Lactococcus lactis strain CBA3619]
MIEKTYFTGSIEAIFFSNPSNFYKVLLIEIDETNAEYDDFEIVVNGTIGDVVEGDSYTFYGQLTQHPKYGEQLQVSQYEK
AVPTSGAGLVKYFSSDKFPGIGKKTAEKIVETFPENTVDSILEAPEKLDGLLTLARKNSFIKRLRENHGMEKVLTKLAEY
GLPSKITFQIYELYKEETIEKIEENPYQLVEDVKGVGFKTADKIASSLGIEADSSNRFRAALMHEVNTHSQSTGDTYIEA
KNLLEMTIDLLEEARNVEVNPSAVAEEINGLIVDGKVQQEGTKIFENSLYFAEDGIRKSLTALTNRSGKDFADEKLLTVL
AEVEKDLEITYDDLQKQAIIGAMNQQFFILTGGPGTGKTTIINGFIETYARLHQLDLDPDHYNDDVFPILLAAPTGRASR
RMNELTGLPAATIHRHLGLGQDEAEDALGNELSGALLIVDEFSMVDTWLANKLFQAIPGSMKVLLVGDADQLPSVGPGQI
FADLLKIPEIPSVKLDKIFRQGDDSTITDLAHHIKDGQLPSDFTAKKPDRSYFEVSANFVPQMVEQIASAWQKRGNNPFE
LQILAPMYKGMAGINAMNVLLQNLFNPLNDRLEFALGDMKFREGDKVLHLVNDAEANVFNGDLGQIVELIAAKYTDSKQD
ELVMDFDGQELTYPRAEWYKITLAYAMSIHKSQGSEFSTVIVPMVSSYSRMLERNLLYTAITRAKQSLILLGEERAFAQA
VAREGANRKTYLIERFMGENPAAKNLSVEIVSEKVTDKKERSNKEKKLATPVELQGQNHSVSKKMPAKVEEISLFEDEEI
ETLDQGSLTEALILSGNFDPLIGLTQQDFAIFNK

Nucleotide

• Length: 2505 bp

>NTDB_id=331582 FGL73_RS06100 WP_104141503.1 1301993..1304497(-) (recD/recD2/recDB) [Lactococcus lactis strain CBA3619]
ATGATTGAAAAAACTTATTTTACTGGTTCGATTGAGGCAATATTTTTCTCCAATCCCAGTAATTTTTATAAAGTTCTACT
CATTGAAATTGATGAAACTAATGCTGAATATGATGATTTTGAAATTGTGGTTAACGGAACAATTGGAGATGTGGTTGAAG
GAGATTCTTATACATTTTATGGTCAATTGACGCAGCATCCTAAGTATGGGGAACAATTACAGGTCAGTCAATATGAAAAA
GCAGTGCCGACTTCTGGTGCTGGTTTAGTTAAATATTTTTCTTCAGATAAATTTCCTGGAATTGGTAAGAAAACGGCAGA
AAAAATTGTTGAAACTTTTCCTGAAAATACGGTAGATTCAATTTTAGAAGCGCCGGAAAAATTGGATGGTCTATTGACCC
TAGCCAGAAAAAATTCATTTATCAAACGATTACGTGAGAACCATGGAATGGAAAAAGTGCTGACCAAGCTTGCAGAATAC
GGCTTACCAAGCAAAATCACTTTTCAAATTTATGAACTTTATAAAGAAGAAACGATTGAAAAAATTGAGGAAAATCCTTA
TCAACTTGTGGAAGATGTTAAGGGAGTTGGTTTTAAAACAGCTGATAAGATTGCAAGTAGTTTAGGAATTGAAGCAGATA
GCTCTAATCGATTTCGAGCGGCATTGATGCATGAGGTCAATACGCATTCGCAATCAACAGGTGATACTTACATTGAAGCC
AAAAATTTACTTGAGATGACGATAGATTTACTTGAAGAAGCTCGTAATGTCGAGGTCAATCCGTCTGCTGTTGCGGAGGA
AATTAATGGTTTAATTGTTGATGGAAAAGTGCAACAAGAAGGAACAAAAATATTTGAGAATTCTTTGTACTTTGCTGAGG
ACGGGATTCGGAAATCACTGACAGCATTAACTAATCGTTCTGGTAAAGATTTTGCTGATGAAAAGTTACTGACAGTTTTG
GCTGAAGTTGAAAAAGATTTAGAAATTACTTATGATGATTTGCAAAAGCAAGCCATTATTGGTGCAATGAATCAGCAATT
TTTCATTTTGACTGGTGGACCAGGAACTGGTAAAACAACAATTATTAATGGTTTTATTGAAACTTATGCCCGTCTTCACC
AGCTAGATTTGGACCCAGACCATTATAATGATGATGTCTTTCCTATATTACTGGCAGCACCGACTGGTCGGGCTTCAAGA
CGGATGAATGAGTTGACTGGTCTTCCAGCAGCAACGATTCACCGCCATTTGGGTTTGGGACAAGATGAAGCAGAAGATGC
TCTTGGAAATGAATTGTCTGGTGCTCTTTTGATTGTTGACGAATTTTCTATGGTTGATACTTGGTTAGCTAATAAACTTT
TTCAAGCGATTCCTGGTTCAATGAAAGTTCTCCTTGTTGGAGATGCTGACCAGCTTCCTTCTGTGGGGCCAGGACAAATT
TTTGCGGATTTACTAAAAATTCCAGAAATTCCGTCAGTAAAATTGGATAAAATTTTTCGTCAAGGGGATGATTCTACCAT
TACTGATTTAGCTCACCATATCAAAGATGGGCAATTGCCAAGTGATTTCACGGCGAAAAAGCCTGACCGTTCATATTTTG
AGGTCAGTGCTAATTTTGTTCCTCAGATGGTTGAACAAATCGCAAGTGCATGGCAAAAAAGAGGGAATAATCCTTTTGAA
TTACAGATCTTAGCGCCTATGTATAAAGGAATGGCCGGAATTAATGCAATGAATGTTCTTTTACAAAATCTCTTTAACCC
ACTTAATGACCGACTTGAATTCGCTTTGGGTGATATGAAATTTCGTGAAGGAGATAAAGTTCTTCATTTAGTAAATGATG
CTGAGGCCAATGTATTTAACGGAGATTTGGGACAAATCGTAGAATTGATTGCAGCAAAATATACTGACAGTAAACAAGAT
GAGTTGGTGATGGATTTTGATGGTCAAGAATTGACTTATCCAAGAGCGGAGTGGTATAAAATTACTCTGGCTTATGCTAT
GTCCATTCATAAATCTCAAGGTTCGGAGTTTTCCACAGTTATTGTACCGATGGTTTCTTCGTATTCACGCATGTTAGAGC
GAAATTTGCTTTATACGGCAATTACAAGGGCTAAACAAAGTCTGATTTTACTTGGTGAAGAACGAGCTTTTGCACAAGCG
GTGGCGCGTGAAGGGGCGAATCGAAAGACCTATCTGATCGAGCGATTTATGGGAGAAAACCCAGCGGCTAAAAATCTGTC
AGTAGAAATTGTGAGTGAAAAAGTTACTGACAAAAAAGAAAGATCTAACAAAGAGAAGAAGCTTGCAACGCCAGTAGAAT
TACAAGGGCAAAATCATTCTGTCAGTAAAAAAATGCCAGCAAAAGTAGAAGAAATTTCTTTATTTGAAGATGAAGAAATT
GAAACACTGGATCAGGGAAGCTTGACAGAAGCACTTATTTTGTCAGGAAATTTTGACCCTTTAATTGGTTTAACTCAACA
AGACTTTGCAATCTTTAATAAATAA

Domains

Predicted by InterProScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (577-646)

• Helix-hairpin-helix containing domain (HHH_RecD2) (146-237)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (664-710)

• AAA domain (AAA_30) (331-522)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD/recD2/recDB	Bacillus subtilis subsp. subtilis str. 168	42.042	90.408	0.38