Detailed information NTG0032841

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: DTPSY_RS14240
• Genome accession: NC_011992
• Coordinates: 3025453..3026601 (+)
• Length: 382 a.a.
• NCBI ID: WP_015914151.1
• Uniprot ID: A0A9J9Q8U5
• Organism: [Acidovorax] ebreus TPSY
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3020453..3031601

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DTPSY_RS14220 (Dtpsy_2839)	coaD	3021308..3021805 (-)	498	WP_011806614.1	pantetheine-phosphate adenylyltransferase	-
DTPSY_RS14225 (Dtpsy_2840)	rsmD	3021951..3022574 (-)	624	WP_015914148.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
DTPSY_RS14230 (Dtpsy_2841)	-	3022571..3023953 (-)	1383	WP_015914149.1	pitrilysin family protein	-
DTPSY_RS14235 (Dtpsy_2842)	-	3023969..3025423 (-)	1455	WP_015914150.1	pitrilysin family protein	-
DTPSY_RS14240 (Dtpsy_2843)	pilA	3025453..3026601 (+)	1149	WP_015914151.1	signal recognition particle-docking protein FtsY	Machinery gene
DTPSY_RS14245 (Dtpsy_2844)	cutA	3026653..3027015 (-)	363	WP_015914152.1	divalent-cation tolerance protein CutA	-
DTPSY_RS14250 (Dtpsy_2845)	rpoH	3027207..3028142 (+)	936	WP_015914153.1	RNA polymerase sigma factor RpoH	-
DTPSY_RS14255 (Dtpsy_2846)	-	3028269..3029279 (+)	1011	WP_015914154.1	tripartite tricarboxylate transporter substrate binding protein	-
DTPSY_RS14260 (Dtpsy_2847)	-	3029516..3030298 (+)	783	WP_015914155.1	Crp/Fnr family transcriptional regulator	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 39783.52 Da
• Isoelectric Point: 5.9996

>NTDB_id=32841 DTPSY_RS14240 WP_015914151.1 3025453..3026601(+) (pilA) [[Acidovorax] ebreus TPSY]
MFSFFKKKPPTPTEPALAPEDVASPAAPPAADAPASGGAFGWLRKPFGAGATSVADPAAPSAGAPAAIDAPLAVPEPTPK
PGGARQGWMDRLKSGLRKTGSSIATVFTGTQINDALYDELEEALLMADTGVKATQHLLEDLKRRVKETKTTEPAAVKGLL
ADALADLLRPLEKPLVIGEHTPTVIMVAGVNGAGKTTSIGKLTKHLADHGESVLLAAADTFRAAAREQLGVWATRNTVEI
VSQEGGDPAAVSFDAVTAGRARGKDVVLVDTAGRLPTQLHLMEELKKIRRVVTKADASAPHEVLLVIDGNTGQNALAQVR
AFDDALQLTGLIVTKLDGTAKGGVLAAIAQERPVPVYFIGVGEKVEDLETFSAREFAQALLT

Nucleotide

• Length: 1149 bp

>NTDB_id=32841 DTPSY_RS14240 WP_015914151.1 3025453..3026601(+) (pilA) [[Acidovorax] ebreus TPSY]
ATGTTCAGTTTTTTCAAGAAGAAACCGCCCACCCCCACCGAACCCGCCCTTGCACCCGAGGACGTGGCCAGCCCTGCGGC
GCCGCCCGCGGCCGACGCCCCCGCCAGCGGCGGCGCATTCGGCTGGCTGCGCAAGCCCTTTGGCGCAGGCGCCACCAGCG
TGGCGGACCCGGCTGCCCCTTCGGCCGGTGCCCCCGCAGCCATCGACGCGCCCCTTGCCGTCCCCGAGCCCACCCCGAAG
CCCGGGGGCGCACGCCAGGGCTGGATGGACCGGCTGAAATCCGGCCTGCGCAAGACCGGCAGCAGCATCGCGACCGTCTT
CACGGGCACGCAGATCAACGACGCGCTGTACGACGAGCTGGAGGAAGCCCTGCTCATGGCCGACACCGGGGTGAAAGCCA
CACAGCACCTGCTGGAGGACCTCAAGCGCCGCGTGAAAGAAACCAAGACCACCGAGCCTGCTGCCGTAAAGGGACTGCTG
GCCGATGCGCTGGCCGACCTGCTGCGGCCGCTGGAAAAGCCGCTGGTGATCGGCGAGCACACACCCACCGTGATCATGGT
GGCCGGCGTGAACGGCGCGGGCAAGACCACCTCCATCGGCAAGCTCACCAAGCACCTGGCCGACCATGGCGAGAGCGTGC
TGCTGGCCGCCGCCGATACCTTCCGCGCCGCGGCGCGCGAGCAGTTGGGTGTCTGGGCCACGCGCAACACGGTGGAGATC
GTCAGCCAGGAAGGGGGCGACCCTGCCGCCGTGAGCTTTGACGCCGTTACCGCCGGCCGCGCGCGCGGCAAAGATGTGGT
GCTGGTGGACACTGCCGGCCGCCTGCCTACGCAGCTGCACCTGATGGAAGAGCTGAAGAAGATCCGCCGCGTGGTCACCA
AGGCCGATGCCAGCGCCCCGCACGAGGTGCTACTGGTGATCGACGGCAACACCGGCCAGAACGCCCTGGCGCAGGTGCGC
GCGTTCGACGACGCGCTTCAACTCACCGGCCTGATCGTCACCAAACTGGACGGCACGGCCAAGGGCGGCGTGCTGGCCGC
CATCGCGCAGGAGCGGCCCGTGCCCGTGTACTTCATTGGCGTGGGCGAGAAGGTGGAAGACCTGGAGACCTTCAGCGCAC
GCGAATTCGCCCAGGCCCTGCTGACCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (182-381)

• SRP54-type protein, helical bundle domain (SRP54_N) (101-164)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	49.88	100	0.545