Detailed information
Bioinformatically predicted
Overview
| Name | comF | Type | Machinery gene |
| Locus tag | EG347_RS09720 | Genome accession | NZ_CP033918 |
| Coordinates | 2190196..2190849 (+) | Length | 217 a.a. |
| NCBI ID | WP_123942821.1 | Uniprot ID | A0A3G6PC13 |
| Organism | Chryseobacterium sp. G0186 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2185196..2195849
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EG347_RS09705 (EG347_09780) | aceA | 2185524..2186804 (-) | 1281 | WP_123942815.1 | isocitrate lyase | - |
| EG347_RS09710 (EG347_09785) | aceB | 2186932..2188506 (-) | 1575 | WP_123942817.1 | malate synthase A | - |
| EG347_RS09715 (EG347_09790) | - | 2188633..2190105 (+) | 1473 | WP_123942819.1 | helix-turn-helix domain-containing protein | - |
| EG347_RS09720 (EG347_09795) | comF | 2190196..2190849 (+) | 654 | WP_123942821.1 | ComF family protein | Machinery gene |
| EG347_RS09725 (EG347_09800) | - | 2190981..2191667 (+) | 687 | WP_123942823.1 | alpha/beta fold hydrolase | - |
| EG347_RS09730 (EG347_09805) | upp | 2191669..2192319 (-) | 651 | WP_123942825.1 | uracil phosphoribosyltransferase | - |
| EG347_RS09735 (EG347_09810) | der | 2192474..2193784 (-) | 1311 | WP_123942826.1 | ribosome biogenesis GTPase Der | - |
| EG347_RS23105 | - | 2194902..2195636 (-) | 735 | Protein_1957 | recombinase family protein | - |
Sequence
Protein
Download Length: 217 a.a. Molecular weight: 25410.30 Da Isoelectric Point: 7.2222
>NTDB_id=327086 EG347_RS09720 WP_123942821.1 2190196..2190849(+) (comF) [Chryseobacterium sp. G0186]
MILDLFFPNRCIHCNRIIEPELLVCDLCYTQIHFTHYDYFETNPIREKCKLLFPVENTYALIQFEEESVSRKIIHELKYK
GRENVGKILAEWTTEQLNFQNQVPDLMVSVPLHPKKLRERGYNQLHLFTETLSKFYNIPFDHHLITRNHYSKAQALKNKQ
RRLETANTFSVTQPITGKHILLIDDVFTTGNTVSSIAWEILNAGDNKVSVLVMAMDV
MILDLFFPNRCIHCNRIIEPELLVCDLCYTQIHFTHYDYFETNPIREKCKLLFPVENTYALIQFEEESVSRKIIHELKYK
GRENVGKILAEWTTEQLNFQNQVPDLMVSVPLHPKKLRERGYNQLHLFTETLSKFYNIPFDHHLITRNHYSKAQALKNKQ
RRLETANTFSVTQPITGKHILLIDDVFTTGNTVSSIAWEILNAGDNKVSVLVMAMDV
Nucleotide
Download Length: 654 bp
>NTDB_id=327086 EG347_RS09720 WP_123942821.1 2190196..2190849(+) (comF) [Chryseobacterium sp. G0186]
ATGATACTGGATTTATTTTTTCCAAACCGATGCATTCATTGCAATAGAATCATTGAACCTGAACTTCTAGTTTGTGACCT
CTGCTACACCCAAATTCATTTTACGCATTATGATTATTTTGAGACTAATCCGATCAGAGAAAAATGTAAACTCCTTTTCC
CAGTGGAGAACACCTATGCCTTAATCCAGTTTGAGGAAGAAAGTGTAAGCCGGAAAATTATTCATGAGTTAAAATACAAA
GGTAGAGAGAACGTGGGAAAAATTCTTGCCGAATGGACAACCGAGCAGCTTAATTTTCAAAATCAAGTTCCTGATCTCAT
GGTAAGTGTACCTCTACATCCTAAAAAGCTACGGGAAAGAGGCTACAATCAGCTTCATTTATTTACAGAAACACTTTCAA
AATTTTACAACATCCCATTTGATCATCATTTGATTACAAGAAATCATTATTCCAAAGCACAGGCTTTAAAGAATAAACAG
CGCCGACTGGAAACAGCGAACACATTTTCAGTTACCCAGCCCATCACCGGAAAACACATTCTTTTGATAGATGATGTCTT
TACGACAGGAAACACCGTCTCGTCTATTGCATGGGAAATTCTAAATGCCGGAGACAATAAAGTGAGCGTATTGGTAATGG
CAATGGATGTTTGA
ATGATACTGGATTTATTTTTTCCAAACCGATGCATTCATTGCAATAGAATCATTGAACCTGAACTTCTAGTTTGTGACCT
CTGCTACACCCAAATTCATTTTACGCATTATGATTATTTTGAGACTAATCCGATCAGAGAAAAATGTAAACTCCTTTTCC
CAGTGGAGAACACCTATGCCTTAATCCAGTTTGAGGAAGAAAGTGTAAGCCGGAAAATTATTCATGAGTTAAAATACAAA
GGTAGAGAGAACGTGGGAAAAATTCTTGCCGAATGGACAACCGAGCAGCTTAATTTTCAAAATCAAGTTCCTGATCTCAT
GGTAAGTGTACCTCTACATCCTAAAAAGCTACGGGAAAGAGGCTACAATCAGCTTCATTTATTTACAGAAACACTTTCAA
AATTTTACAACATCCCATTTGATCATCATTTGATTACAAGAAATCATTATTCCAAAGCACAGGCTTTAAAGAATAAACAG
CGCCGACTGGAAACAGCGAACACATTTTCAGTTACCCAGCCCATCACCGGAAAACACATTCTTTTGATAGATGATGTCTT
TACGACAGGAAACACCGTCTCGTCTATTGCATGGGAAATTCTAAATGCCGGAGACAATAAAGTGAGCGTATTGGTAATGG
CAATGGATGTTTGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comF | Riemerella anatipestifer ATCC 11845 = DSM 15868 |
51.389 |
99.539 |
0.512 |