Detailed information NTG0326630

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: EG365_RS16725
• Genome accession: NZ_CP033866
• Coordinates: 3422659..3423360 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter sp. FDAARGOS_494
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3417659..3428360

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EG365_RS16690 (EG365_16700)	kdsB	3418182..3418943 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
EG365_RS16695 (EG365_16705)	-	3418955..3419935 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
EG365_RS16700 (EG365_16710)	-	3419947..3420288 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
EG365_RS16705 (EG365_16715)	-	3420306..3421079 (+)	774	WP_000497298.1	TatD family hydrolase	-
EG365_RS16710 (EG365_16720)	-	3421117..3421725 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
EG365_RS16715 (EG365_16725)	-	3421735..3422289 (+)	555	WP_000841373.1	type II secretion system protein	-
EG365_RS16720 (EG365_16730)	xcpV	3422279..3422659 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
EG365_RS16725 (EG365_16735)	xcpW	3422659..3423360 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
EG365_RS16730 (EG365_16740)	gspK	3423360..3424319 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
EG365_RS16735 (EG365_16745)	-	3424550..3425146 (+)	597	WP_000908452.1	6-pyruvoyl trahydropterin synthase family protein	-
EG365_RS16740 (EG365_16750)	ung	3425197..3425910 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
EG365_RS16745 (EG365_16755)	-	3425907..3427031 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
EG365_RS16750 (EG365_16760)	tadA	3427038..3427541 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
EG365_RS16755 (EG365_16765)	-	3427611..3428054 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=326630 EG365_RS16725 WP_000594589.1 3422659..3423360(+) (xcpW) [Acinetobacter sp. FDAARGOS_494]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=326630 EG365_RS16725 WP_000594589.1 3422659..3423360(+) (xcpW) [Acinetobacter sp. FDAARGOS_494]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996