Detailed information NTG0326124

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: EGX82_RS05015
• Genome accession: NZ_CP033822
• Coordinates: 960082..961014 (-)
• Length: 310 a.a.
• NCBI ID: WP_000138504.1
• Uniprot ID: A0AAW6XWB6
• Organism: Streptococcus agalactiae strain FDAARGOS_512
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 955082..966014

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EGX82_RS05015 (EGX82_05015)	amiF	960082..961014 (-)	933	WP_000138504.1	ATP-binding cassette domain-containing protein	Regulator
EGX82_RS05020 (EGX82_05020)	oppD	961014..962060 (-)	1047	WP_000410286.1	ABC transporter ATP-binding protein	Regulator
EGX82_RS05025 (EGX82_05025)	-	962073..963104 (-)	1032	WP_000764052.1	ABC transporter permease	-
EGX82_RS05030 (EGX82_05030)	-	963114..964028 (-)	915	WP_000598965.1	ABC transporter permease	-
EGX82_RS05035 (EGX82_05035)	-	964147..965802 (-)	1656	WP_001118756.1	peptide ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 310 a.a.
• Molecular weight: 34901.76 Da
• Isoelectric Point: 6.7289

>NTDB_id=326124 EGX82_RS05015 WP_000138504.1 960082..961014(-) (amiF) [Streptococcus agalactiae strain FDAARGOS_512]
MTENRKKLVEVKNVSLTFNKGKANEVRAIDNVSFDIYEGEVFGLVGESGSGKTTVGRSILKLYDISDGEITFNGEVISHL
KGKALHSFRKDAQMIFQDPQASLNGRMKIRDIVAEGLDIHKLAKSKSDRDSKVQALLDLVGLNKDHLTRYPHEFSGGQRQ
RIGIARALAVEPKFIIADEPISALDVSIQAQVVNLMQKLQREQGLTYLFIAHDLSMVKYISDRIGVMHWGKLLEVGTSDD
VYNNPIHPYTKSLLSAIPEPDPESERQRVHQPYNPAIEQDGQERQMHEITPCHFVLSTPQEAEEYKKQIL

Nucleotide

• Length: 933 bp

>NTDB_id=326124 EGX82_RS05015 WP_000138504.1 960082..961014(-) (amiF) [Streptococcus agalactiae strain FDAARGOS_512]
ATGACTGAAAATCGAAAAAAATTAGTTGAAGTCAAAAATGTTTCTTTGACCTTCAATAAAGGAAAAGCTAATGAAGTGAG
AGCAATTGATAATGTTAGTTTTGACATTTATGAAGGTGAAGTGTTTGGATTAGTTGGGGAATCTGGATCAGGAAAGACAA
CCGTTGGACGTTCAATTTTAAAACTTTATGATATTTCTGATGGAGAAATTACCTTTAATGGAGAAGTGATCTCACATCTG
AAAGGTAAAGCATTACATAGTTTTCGTAAAGACGCTCAGATGATTTTTCAGGATCCTCAGGCTAGCTTAAACGGCCGTAT
GAAGATTCGTGATATCGTAGCAGAAGGTTTAGATATACATAAATTAGCTAAATCAAAATCAGATCGTGATAGTAAAGTTC
AGGCCCTATTAGATCTTGTAGGGTTAAATAAAGATCATTTAACACGTTATCCGCATGAATTTTCAGGTGGACAACGACAA
CGTATCGGGATTGCACGTGCTTTAGCAGTAGAGCCTAAATTTATCATTGCTGATGAACCAATATCTGCCTTAGATGTTTC
AATCCAAGCACAAGTTGTTAATTTAATGCAAAAATTGCAAAGAGAACAAGGATTGACTTATTTGTTTATCGCACATGATT
TGTCTATGGTAAAATACATTTCAGATCGTATCGGTGTTATGCATTGGGGAAAACTGTTAGAAGTTGGGACATCTGATGAT
GTTTATAACAATCCAATCCACCCCTATACGAAGAGTCTATTATCAGCTATTCCAGAACCAGATCCGGAGAGTGAACGTCA
ACGTGTTCACCAGCCGTATAATCCAGCTATTGAGCAAGACGGACAAGAACGTCAAATGCACGAGATTACCCCTTGTCATT
TTGTTTTATCTACACCCCAAGAAGCTGAAGAATATAAAAAACAAATATTATAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-271)

• ABC transporter (ABC_tran) (30-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	54.221	99.355	0.539
amiF	Streptococcus thermophilus LMG 18311	53.896	99.355	0.535
amiF	Streptococcus salivarius strain HSISS4	54.098	98.387	0.532