Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   EGX70_RS01095 Genome accession   NZ_CP033808
Coordinates   216719..218473 (+) Length   584 a.a.
NCBI ID   WP_123947837.1    Uniprot ID   -
Organism   Streptococcus sp. FDAARGOS_522     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 211719..223473
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EGX70_RS01080 (EGX70_01080) - 212084..214156 (-) 2073 WP_000726914.1 bifunctional metallophosphatase/5'-nucleotidase -
  EGX70_RS01085 (EGX70_01085) - 214425..214865 (+) 441 WP_000431168.1 MarR family winged helix-turn-helix transcriptional regulator -
  EGX70_RS01090 (EGX70_01090) rcrP 214912..216729 (+) 1818 WP_000481821.1 ABC transporter ATP-binding protein Regulator
  EGX70_RS01095 (EGX70_01095) rcrQ 216719..218473 (+) 1755 WP_123947837.1 ABC transporter ATP-binding protein Regulator
  EGX70_RS01100 (EGX70_01100) - 218581..219207 (+) 627 WP_000449636.1 GTP pyrophosphokinase family protein -
  EGX70_RS01105 (EGX70_01105) - 219209..219895 (+) 687 WP_001264422.1 response regulator transcription factor -
  EGX70_RS01110 (EGX70_01110) - 219895..221124 (+) 1230 WP_000489520.1 HAMP domain-containing sensor histidine kinase -
  EGX70_RS01115 (EGX70_01115) mvk 221240..222118 (+) 879 WP_000659719.1 mevalonate kinase -
  EGX70_RS01120 (EGX70_01120) mvaD 222100..223044 (+) 945 WP_000348826.1 diphosphomevalonate decarboxylase -

Sequence

Protein


Download         Length: 584 a.a.        Molecular weight: 64526.82 Da        Isoelectric Point: 7.0193

>NTDB_id=325807 EGX70_RS01095 WP_123947837.1 216719..218473(+) (rcrQ) [Streptococcus sp. FDAARGOS_522]
MKTKSQKTSFFSNLSPYLKGYKLLFALAIVLATLSSLTTVIGPDRLKEMTDLMVKGLAGNIDLAKIGHIAGQLAVLYVLG
ALVSYLASFIVTTIIQKFAQGMRNAIADKINKIPLSYFDSHTQGDTLSRVTNDVDLMTQSFNQSLVTMVASTVLLIGSLI
MMFKTDWHLATTAIISVFSGFALSSIIMVKSQPLFKKQQMNLANISGYVEEIYSGHNIVTSHNARQQAKSDFQLLNDKIH
SSMWKSQFFSGIMMPLMQFIGNFGYVMVCVVGAMLAIKGTITMGTIVAFMTYVRIFTQPIGQIAQGITQLQSASAAMGRV
FEFLNETNMQEDKHKVLNLPKFKGYVSFEHVKFGYSDNKTIIHDFTSEAQPGQKVAIVGPTGAGKTTIVNLLMRFYDVNS
GSISIDDINIQDMKRSQVHDAFSMVLQDIWLFEGTIKENLIFNQTTISDDEVQEAAKAVGVHHFIMTLPKGYDTVLDDAV
TLSVGQKQLLTIARALLENSPLLILDEATSSVDTRTEELIQKAMDKLMEGRTSFVIAHRLSTIKNADLILVMKDGNIIEQ
GSHDVLMSQSGFYADLYNSQFESA

Nucleotide


Download         Length: 1755 bp        

>NTDB_id=325807 EGX70_RS01095 WP_123947837.1 216719..218473(+) (rcrQ) [Streptococcus sp. FDAARGOS_522]
ATGAAAACTAAATCACAAAAAACGTCTTTTTTCTCTAATTTGTCTCCGTACCTCAAAGGTTACAAACTTCTTTTTGCGTT
AGCAATTGTGTTAGCAACTTTATCAAGCTTGACAACAGTTATAGGACCAGACCGTCTTAAAGAGATGACGGATCTTATGG
TAAAAGGCTTGGCTGGTAATATTGACTTAGCCAAAATCGGTCATATTGCAGGGCAATTGGCAGTATTATATGTTTTAGGT
GCATTAGTATCCTATCTAGCAAGTTTTATTGTAACGACTATTATTCAAAAATTTGCTCAAGGCATGCGCAATGCTATTGC
TGATAAAATCAATAAAATACCTTTGAGTTATTTTGATAGCCATACTCAAGGTGATACTTTATCTCGTGTTACAAATGATG
TGGATTTGATGACACAGTCTTTTAACCAAAGTTTAGTTACTATGGTTGCATCTACAGTATTATTGATTGGTTCATTAATT
ATGATGTTCAAAACAGATTGGCATTTAGCAACAACGGCGATTATATCGGTATTTTCAGGATTCGCTCTTTCTTCAATCAT
TATGGTGAAGAGTCAGCCTTTATTTAAAAAGCAACAGATGAATTTGGCTAATATATCTGGATATGTAGAAGAAATTTACT
CAGGACATAACATTGTTACTAGTCATAACGCAAGACAGCAGGCTAAGTCAGATTTTCAACTATTAAATGATAAAATTCAC
AGTTCCATGTGGAAATCACAATTTTTCTCTGGAATTATGATGCCTCTGATGCAGTTTATTGGTAATTTTGGTTATGTGAT
GGTGTGTGTGGTTGGTGCCATGTTAGCTATCAAAGGAACAATTACTATGGGTACAATTGTTGCTTTTATGACCTATGTTC
GTATTTTTACACAGCCTATTGGTCAGATTGCTCAAGGAATTACACAATTACAGTCTGCTAGTGCAGCCATGGGACGTGTT
TTTGAATTTTTAAATGAAACAAATATGCAAGAGGATAAGCACAAAGTGTTAAATCTTCCTAAGTTTAAGGGGTATGTGTC
CTTTGAACATGTCAAGTTTGGTTATAGTGATAACAAGACTATTATTCATGACTTTACTTCGGAGGCACAGCCTGGTCAGA
AAGTTGCTATTGTAGGACCAACTGGCGCAGGTAAAACGACAATTGTTAATTTATTGATGCGTTTTTATGATGTTAATTCA
GGTAGTATTTCCATAGATGACATCAATATCCAAGACATGAAACGTAGTCAAGTTCATGATGCTTTCTCGATGGTTCTTCA
AGATATATGGTTGTTTGAGGGAACTATTAAAGAAAATTTGATTTTTAATCAGACGACAATCAGTGACGATGAGGTTCAAG
AAGCTGCTAAGGCAGTCGGTGTACATCATTTTATAATGACACTACCTAAAGGGTATGATACTGTCCTTGATGACGCTGTG
ACATTGTCAGTTGGACAAAAGCAATTATTAACCATTGCTCGAGCTCTTTTGGAAAATTCTCCCTTACTTATCTTAGATGA
AGCAACTTCATCTGTTGATACACGTACAGAAGAGTTAATTCAAAAAGCTATGGACAAACTTATGGAAGGAAGAACATCAT
TTGTTATCGCACATCGTTTATCAACGATTAAAAACGCAGATTTGATTTTGGTCATGAAAGATGGGAATATCATTGAGCAA
GGCAGTCATGATGTTTTGATGTCTCAAAGTGGTTTTTATGCTGATCTGTATAATTCTCAATTCGAATCAGCTTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(364-510)

ABC transporter transmembrane region (ABC_membrane)

(26-299)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

75.952

98.973

0.752

Multiple sequence alignment