Detailed information NTG0324865

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: DXF96_RS15715
• Genome accession: NZ_CP033687
• Coordinates: 3255442..3257865 (-)
• Length: 807 a.a.
• NCBI ID: WP_014097912.1
• Uniprot ID: A0AAU7WKF3
• Organism: Heyndrickxia coagulans strain DSM 2314
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3250442..3262865

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DXF96_RS15685 (DXF96_16115)	-	3251786..3252877 (-)	1092	WP_014097920.1	AI-2E family transporter	-
DXF96_RS15690 (DXF96_16120)	-	3253139..3253270 (-)	132	WP_014097919.1	DUF3918 family protein	-
DXF96_RS15695 (DXF96_16125)	-	3253288..3253500 (-)	213	WP_026104525.1	hypothetical protein	-
DXF96_RS15700 (DXF96_16130)	-	3253659..3254099 (+)	441	WP_110134304.1	YndM family protein	-
DXF96_RS15705 (DXF96_16135)	-	3254138..3254488 (-)	351	WP_017550592.1	Lrp/AsnC family transcriptional regulator	-
DXF96_RS18205	-	3254495..3254599 (-)	105	WP_014097915.1	AsnC family transcriptional regulator	-
DXF96_RS15710 (DXF96_16140)	-	3254931..3255275 (+)	345	Protein_3005	Glu/Leu/Phe/Val dehydrogenase dimerization domain-containing protein	-
DXF96_RS15715 (DXF96_16145)	recD2	3255442..3257865 (-)	2424	WP_014097912.1	ATP-dependent RecD-like DNA helicase	Machinery gene
DXF96_RS15720 (DXF96_16150)	-	3257876..3258544 (-)	669	WP_014097911.1	tetratricopeptide repeat protein	-
DXF96_RS15725 (DXF96_16155)	mnmA	3258910..3260025 (-)	1116	WP_017550593.1	tRNA 2-thiouridine(34) synthase MnmA	-
DXF96_RS15730 (DXF96_16160)	-	3260041..3261186 (-)	1146	WP_014097909.1	cysteine desulfurase family protein	-
DXF96_RS15735 (DXF96_16165)	-	3261203..3261622 (-)	420	WP_014097908.1	Rrf2 family transcriptional regulator	-
DXF96_RS18050	-	3261936..3262289 (-)	354	WP_230951703.1	hypothetical protein	-
DXF96_RS18055	-	3262400..3262597 (-)	198	WP_230951702.1	hypothetical protein	-
DXF96_RS18210 (DXF96_16175)	-	3262599..3262748 (-)	150	Protein_3013	hypothetical protein	-

Sequence

Protein

• Length: 807 a.a.
• Molecular weight: 90693.73 Da
• Isoelectric Point: 4.8812

>NTDB_id=324865 DXF96_RS15715 WP_014097912.1 3255442..3257865(-) (recD2) [Heyndrickxia coagulans strain DSM 2314]
MEKQHAMDLFQDEENFIKGKHLATIFHNEQNLYSVIRVRVEETNTGLEDKETVITGYFPRIHEQETYTFFGKMQEHPKFG
PQFQANRFQKDIPNTKQGVIEYLSSDLFNGIGKKTAERIVGVLGENAISKILENPAALDEVPKLAPEKAQLIRDTLVEHQ
GLERVMIGLAQYGFGPQIAMRIYQVYEDEALEKIAQNPYQLVDDIKGIGFGRADELGRQLGISGTHPHRIQAGCCYMLEM
ESMQHGHVYVLKEELAQDVKALLEEYQHVEIPMDLIENELVKLQEESKVIMEEDKVYLPSLYFSEKGIVSNIERIMSQTE
YAEQFPESEFLLALGSLEERIGVEYAPSQKEAIQKALMSPMMILTGGPGTGKTTVIKGIVELYGELHGVSLDPQTYKKDE
VFPIVLAAPTGRAAKRMAESTGLPAMTIHRLLGMTGMEDLDDSEERQVEGKLVIIDEMSMVDTWLANQLLKALPDEIQVI
MVGDEDQLPSVGPGQVLKDLLKSNAIPVVRLTDIYRQKDGSSIIELAHHVKNGRIPENIFQMQADRSFIRCSSGQVAEAV
EKVVKSAKRKGYTAKDIQVLAPMYRGPAGIDRLNSLLQNIFNPNENGARKELKHGDAVYRIGDKVLQLVNQPEHGVYNGD
IGEIVSLFTAKENTEKQDMLIVSFDGIEVTYTKPDFNQITLAYCCSIHKSQGSEFPVVILPVVRSYYRMLRRNLLYTAIT
RSKKILILLGEEPAFRMGVEREDDQKRKTTLCEKLAEALKTAQKEAGTETALSLTEENWDRVDPMIGMAGITPYTYAEEG
QTASQPD

Nucleotide

• Length: 2424 bp

>NTDB_id=324865 DXF96_RS15715 WP_014097912.1 3255442..3257865(-) (recD2) [Heyndrickxia coagulans strain DSM 2314]
TTGGAAAAACAGCATGCGATGGATTTATTCCAGGACGAGGAAAATTTTATAAAAGGAAAGCATCTCGCGACCATCTTCCA
TAACGAGCAAAATTTGTATTCCGTCATCCGTGTGCGGGTGGAAGAGACCAATACCGGGCTGGAAGATAAGGAAACGGTGA
TTACCGGCTATTTTCCGCGCATCCATGAACAGGAAACGTACACCTTTTTTGGAAAAATGCAGGAACACCCGAAATTCGGC
CCCCAGTTCCAGGCAAATCGCTTCCAAAAAGACATCCCCAATACAAAGCAGGGCGTTATTGAGTATCTTTCCAGTGATTT
ATTTAACGGCATCGGCAAAAAAACGGCGGAGCGGATCGTTGGCGTGCTCGGTGAAAATGCGATCAGCAAAATATTGGAAA
ATCCCGCCGCCCTTGACGAAGTACCGAAACTGGCACCGGAAAAAGCGCAGCTGATCCGTGATACGTTAGTTGAACATCAG
GGGCTTGAACGTGTTATGATCGGGCTTGCGCAATACGGTTTCGGGCCGCAGATTGCGATGCGCATTTACCAGGTTTACGA
GGATGAGGCGCTCGAAAAAATTGCGCAAAATCCATACCAGCTCGTTGATGATATTAAAGGCATCGGTTTCGGGCGGGCCG
ATGAACTCGGCCGGCAGCTCGGCATCAGCGGGACGCATCCGCACCGCATCCAGGCCGGCTGCTGTTACATGCTGGAAATG
GAAAGCATGCAGCACGGTCATGTGTACGTCCTGAAAGAAGAACTTGCACAGGATGTCAAAGCCCTTTTGGAAGAATACCA
GCATGTTGAAATCCCGATGGACTTGATTGAAAATGAGCTGGTGAAACTTCAGGAAGAGAGCAAAGTCATCATGGAAGAAG
ACAAAGTCTATCTTCCGTCCCTCTATTTTTCGGAAAAAGGAATCGTTTCCAATATTGAGCGGATTATGTCGCAAACCGAG
TATGCGGAACAGTTCCCGGAATCTGAATTCCTGCTTGCTTTAGGCAGTCTTGAGGAACGGATCGGGGTCGAGTATGCCCC
GTCGCAAAAGGAAGCCATCCAAAAAGCGCTGATGAGTCCGATGATGATTTTAACGGGCGGGCCCGGCACAGGGAAAACAA
CGGTCATTAAAGGGATTGTGGAACTGTACGGTGAATTGCACGGCGTCTCGCTTGACCCGCAAACCTATAAAAAAGATGAG
GTATTTCCGATTGTTCTCGCGGCGCCGACAGGGAGGGCCGCGAAAAGAATGGCGGAGTCAACTGGTCTGCCGGCGATGAC
GATCCACCGCCTGCTCGGCATGACCGGCATGGAGGACCTGGACGATTCAGAGGAACGGCAAGTAGAAGGCAAGCTTGTCA
TCATTGATGAAATGTCGATGGTCGATACATGGCTTGCGAACCAGCTGTTAAAGGCGCTGCCGGATGAAATCCAAGTCATC
ATGGTTGGGGATGAAGACCAGCTGCCGTCCGTCGGTCCAGGCCAGGTGCTGAAAGATTTATTGAAATCGAACGCCATTCC
GGTTGTTAGGCTGACAGACATATACAGGCAGAAAGATGGTTCTTCGATTATTGAACTGGCCCACCATGTTAAAAATGGCC
GTATTCCGGAAAATATTTTTCAAATGCAGGCAGACCGTTCGTTTATCCGCTGTTCTTCCGGGCAGGTGGCGGAAGCGGTG
GAAAAAGTGGTGAAAAGCGCGAAACGGAAAGGCTATACGGCAAAAGACATTCAGGTGCTGGCGCCGATGTACAGGGGGCC
GGCCGGCATTGACCGTCTGAACAGCCTGTTGCAAAATATTTTTAATCCGAATGAGAACGGGGCCCGCAAAGAGCTGAAGC
ACGGGGACGCGGTTTACCGGATCGGCGATAAGGTACTGCAGCTTGTCAACCAGCCGGAACACGGGGTGTATAACGGCGAT
ATCGGCGAGATTGTCTCGCTTTTTACCGCAAAAGAAAATACGGAAAAACAAGATATGCTCATCGTTTCTTTTGATGGGAT
TGAAGTGACGTATACGAAGCCAGATTTCAATCAGATTACGCTTGCGTATTGCTGTTCGATCCATAAATCGCAAGGAAGCG
AGTTTCCGGTCGTAATTTTGCCGGTTGTCCGCAGCTATTACCGGATGCTGCGCCGAAACTTGCTGTATACGGCGATTACA
AGGAGCAAAAAAATTTTAATTCTGCTTGGCGAAGAACCGGCTTTCCGGATGGGTGTGGAAAGGGAAGATGACCAAAAGCG
GAAGACGACACTGTGTGAAAAACTGGCTGAAGCATTAAAAACGGCACAAAAAGAGGCAGGGACGGAGACAGCCCTGTCCT
TAACAGAAGAAAATTGGGACCGGGTCGACCCGATGATTGGCATGGCGGGCATTACCCCGTACACGTACGCAGAAGAAGGA
CAGACTGCGTCCCAACCGGATTAA

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-664)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (682-728)

• Helix-hairpin-helix containing domain (HHH_RecD2) (158-249)

• AAA domain (AAA_30) (345-553)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	60.772	99.504	0.605