Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | Aba7835_RS01640 | Genome accession | NZ_CP033243 |
| Coordinates | 350724..351149 (+) | Length | 141 a.a. |
| NCBI ID | WP_000788337.1 | Uniprot ID | A0A009SG52 |
| Organism | Acinetobacter baumannii strain 7835 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 345724..356149
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Aba7835_RS01630 (Aba7835_01655) | pilY1 | 346378..350232 (+) | 3855 | WP_000768954.1 | PilC/PilY family type IV pilus protein | Machinery gene |
| Aba7835_RS01635 (Aba7835_01660) | pilY2 | 350245..350727 (+) | 483 | WP_001046423.1 | type IV pilin protein | Machinery gene |
| Aba7835_RS01640 (Aba7835_01665) | pilE | 350724..351149 (+) | 426 | WP_000788337.1 | type IV pilin protein | Machinery gene |
| Aba7835_RS01645 (Aba7835_01670) | rpsP | 351296..351547 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| Aba7835_RS01650 (Aba7835_01675) | rimM | 351567..352115 (+) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| Aba7835_RS01655 (Aba7835_01680) | trmD | 352161..352901 (+) | 741 | WP_000464599.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| Aba7835_RS01660 (Aba7835_01685) | rplS | 353109..353477 (+) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| Aba7835_RS01665 (Aba7835_01690) | - | 353530..354471 (-) | 942 | WP_085943974.1 | lipase family alpha/beta hydrolase | - |
| Aba7835_RS01670 (Aba7835_01695) | - | 354586..355617 (-) | 1032 | WP_001189457.1 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15163.36 Da Isoelectric Point: 7.8144
>NTDB_id=322809 Aba7835_RS01640 WP_000788337.1 350724..351149(+) (pilE) [Acinetobacter baumannii strain 7835]
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKIVNNRYPSDATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKIVNNRYPSDATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=322809 Aba7835_RS01640 WP_000788337.1 350724..351149(+) (pilE) [Acinetobacter baumannii strain 7835]
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTCGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACATTAGAATCTC
AAAAAATAGTAAATAACCGTTATCCTTCGGATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTAAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCATTAT
CTGCTTCATCGAGTTGGACCGAGTAA
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTCGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACATTAGAATCTC
AAAAAATAGTAAATAACCGTTATCCTTCGGATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTAAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCATTAT
CTGCTTCATCGAGTTGGACCGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
90.78 |
100 |
0.908 |
| comF | Acinetobacter baylyi ADP1 |
50 |
99.291 |
0.496 |