Detailed information NTG0321451

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: EAE94_RS10625
• Genome accession: NZ_CP033108
• Coordinates: 2200152..2200853 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594584.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii ATCC 17978
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2195152..2205853

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EAE94_RS10595 (EAE94_10620)	-	2195459..2195902 (-)	444	WP_001246675.1	SRPBCC family protein	-
EAE94_RS10600 (EAE94_10625)	tadA	2195972..2196475 (-)	504	WP_000033177.1	tRNA adenosine(34) deaminase TadA	-
EAE94_RS10605 (EAE94_10630)	-	2196482..2197606 (-)	1125	WP_000982062.1	enoyl-CoA hydratase/isomerase family protein	-
EAE94_RS10610 (EAE94_10635)	ung	2197603..2198316 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
EAE94_RS10615 (EAE94_10640)	-	2198367..2198963 (-)	597	WP_000908453.1	6-carboxytetrahydropterin synthase	-
EAE94_RS10620 (EAE94_10645)	gspK	2199193..2200152 (-)	960	WP_000301478.1	type II secretion system minor pseudopilin GspK	-
EAE94_RS10625 (EAE94_10650)	xcpW	2200152..2200853 (-)	702	WP_000594584.1	type II secretion system minor pseudopilin GspJ	Machinery gene
EAE94_RS10630 (EAE94_10655)	xcpV	2200853..2201233 (-)	381	WP_000836915.1	type II secretion system minor pseudopilin GspI	Machinery gene
EAE94_RS10635 (EAE94_10660)	-	2201223..2201777 (-)	555	WP_000841375.1	type II secretion system protein	-
EAE94_RS10640 (EAE94_10665)	-	2201787..2202395 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
EAE94_RS10645 (EAE94_10670)	-	2202433..2203206 (-)	774	WP_000497298.1	TatD family hydrolase	-
EAE94_RS10650 (EAE94_10675)	-	2203224..2203565 (-)	342	WP_001183025.1	PilZ domain-containing protein	-
EAE94_RS10655 (EAE94_10680)	-	2203577..2204557 (-)	981	WP_001075412.1	DNA polymerase III subunit delta'	-
EAE94_RS10660 (EAE94_10685)	kdsB	2204569..2205330 (-)	762	WP_000680696.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26622.59 Da
• Isoelectric Point: 9.5501

>NTDB_id=321451 EAE94_RS10625 WP_000594584.1 2200152..2200853(-) (xcpW) [Acinetobacter baumannii ATCC 17978]
MIKNKYIHIRSIASRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLNQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=321451 EAE94_RS10625 WP_000594584.1 2200152..2200853(-) (xcpW) [Acinetobacter baumannii ATCC 17978]
ATGATAAAAAATAAATATATTCATATCCGAAGCATTGCTTCTCGTCTTGCGGCGCGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAGTTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAATCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996