Detailed information NTG0031889

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: AB57_RS09215
• Genome accession: NC_011586
• Coordinates: 1893371..1894072 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594579.1
• Uniprot ID: A0A0D5YJA0
• Organism: Acinetobacter baumannii AB0057
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1888371..1899072

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB57_RS09180 (AB57_05515)	kdsB	1888894..1889655 (+)	762	WP_000680692.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
AB57_RS09185 (AB57_1803)	-	1889667..1890647 (+)	981	WP_001075416.1	DNA polymerase III subunit delta'	-
AB57_RS09190 (AB57_1804)	-	1890659..1891000 (+)	342	WP_001183027.1	PilZ domain-containing protein	-
AB57_RS09195 (AB57_1805)	-	1891018..1891791 (+)	774	WP_000497300.1	TatD family hydrolase	-
AB57_RS09200 (AB57_1806)	-	1891829..1892437 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
AB57_RS09205 (AB57_1807)	-	1892447..1893001 (+)	555	WP_000841373.1	type II secretion system protein	-
AB57_RS09210 (AB57_1808)	xcpV	1892991..1893371 (+)	381	WP_000836914.1	type II secretion system minor pseudopilin GspI	Machinery gene
AB57_RS09215 (AB57_1809)	xcpW	1893371..1894072 (+)	702	WP_000594579.1	type II secretion system minor pseudopilin GspJ	Machinery gene
AB57_RS09220 (AB57_1810)	gspK	1894072..1895031 (+)	960	WP_000301478.1	type II secretion system minor pseudopilin GspK	-
AB57_RS09225 (AB57_1811)	-	1895261..1895857 (+)	597	WP_000908449.1	6-pyruvoyl trahydropterin synthase family protein	-
AB57_RS09230 (AB57_1812)	ung	1895908..1896621 (+)	714	WP_001177527.1	uracil-DNA glycosylase	-
AB57_RS09235 (AB57_1813)	-	1896618..1897742 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
AB57_RS09240 (AB57_1814)	tadA	1897749..1898252 (+)	504	WP_001997771.1	tRNA adenosine(34) deaminase TadA	-
AB57_RS09245 (AB57_1815)	-	1898322..1898765 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26707.66 Da
• Isoelectric Point: 9.5501

>NTDB_id=31889 AB57_RS09215 WP_000594579.1 1893371..1894072(+) (xcpW) [Acinetobacter baumannii AB0057]
MIKNKYIHIRSFSSRLAARSSSARLTRVSGFTLVELLVAIAIFAVLSLLGWKIFDYLFKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=31889 AB57_RS09215 WP_000594579.1 1893371..1894072(+) (xcpW) [Acinetobacter baumannii AB0057]
ATGATAAAAAATAAATATATTCACATCCGAAGCTTTTCTTCTCGTCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGTCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGTTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCGGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

3D structure

• AlphaFold DB: A0A0D5YJA0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	98.283	100	0.983