Detailed information
Bioinformatically predicted
Overview
| Name | ylbF | Type | Regulator |
| Locus tag | FCJ76_RS08180 | Genome accession | NZ_CP039935 |
| Coordinates | 1553047..1553496 (+) | Length | 149 a.a. |
| NCBI ID | WP_003221370.1 | Uniprot ID | G4NWT8 |
| Organism | Bacillus subtilis strain H19 | ||
| Function | accelerate the production of Spo0A~P (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1548047..1558496
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FCJ76_RS08140 | ctaE | 1548064..1548687 (+) | 624 | WP_003232244.1 | cytochrome c oxidase subunit III | - |
| FCJ76_RS08145 | ctaF | 1548690..1549022 (+) | 333 | WP_003232242.1 | cytochrome c oxidase subunit IVB | - |
| FCJ76_RS08150 | ctaG | 1549049..1549942 (+) | 894 | WP_046664162.1 | cytochrome c oxidase assembly factor CtaG | - |
| FCJ76_RS08155 | ylbA | 1549974..1550336 (-) | 363 | WP_003232238.1 | YugN family protein | - |
| FCJ76_RS08160 | ylbB | 1550476..1550922 (+) | 447 | WP_003221362.1 | CBS domain-containing protein | - |
| FCJ76_RS08165 | ylbC | 1551006..1552046 (+) | 1041 | WP_015483195.1 | CAP domain-containing protein | - |
| FCJ76_RS08170 | ylbD | 1552278..1552676 (+) | 399 | WP_134155385.1 | YlbD family protein | - |
| FCJ76_RS08175 | ylbE | 1552692..1552931 (+) | 240 | WP_003232231.1 | YlbE-like family protein | - |
| FCJ76_RS08180 | ylbF | 1553047..1553496 (+) | 450 | WP_003221370.1 | regulatory iron-sulfur-containing complex subunit RicF | Regulator |
| FCJ76_RS08185 | ylbG | 1553551..1553823 (+) | 273 | WP_015715839.1 | YlbG family protein | - |
| FCJ76_RS08190 | rsmD | 1554146..1554700 (+) | 555 | WP_128992800.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| FCJ76_RS08195 | coaD | 1554705..1555190 (+) | 486 | WP_003245283.1 | pantetheine-phosphate adenylyltransferase | - |
| FCJ76_RS08200 | spoVV | 1555201..1556427 (-) | 1227 | WP_015252149.1 | dipicolinic acid transporter SpoVV | - |
| FCJ76_RS08205 | ylbK | 1556608..1557390 (+) | 783 | WP_021479345.1 | patatin family protein | - |
| FCJ76_RS08210 | sepM | 1557392..1558417 (+) | 1026 | WP_134981785.1 | protease DdcP | Regulator |
Sequence
Protein
Download Length: 149 a.a. Molecular weight: 16913.96 Da Isoelectric Point: 4.9284
>NTDB_id=318744 FCJ76_RS08180 WP_003221370.1 1553047..1553496(+) (ylbF) [Bacillus subtilis strain H19]
MYATMESVRLQSEAQQLAEMILQSETAENYRNCYKRLQEDEEAGRIIRSFIKIKEQYEDVQRFGKYHPDYREISRKMREI
KRELDLNDKVADFKRAENELQSILDEVSVEIGTAVSEHVKVPTGNPYFDGLSSCGGGCGSGGSCGCKVS
MYATMESVRLQSEAQQLAEMILQSETAENYRNCYKRLQEDEEAGRIIRSFIKIKEQYEDVQRFGKYHPDYREISRKMREI
KRELDLNDKVADFKRAENELQSILDEVSVEIGTAVSEHVKVPTGNPYFDGLSSCGGGCGSGGSCGCKVS
Nucleotide
Download Length: 450 bp
>NTDB_id=318744 FCJ76_RS08180 WP_003221370.1 1553047..1553496(+) (ylbF) [Bacillus subtilis strain H19]
ATGTATGCGACGATGGAATCCGTGCGGCTTCAAAGTGAAGCTCAGCAGCTTGCCGAGATGATTCTGCAGTCGGAGACGGC
TGAGAACTACCGCAATTGTTACAAGCGTCTCCAGGAAGATGAAGAGGCAGGGCGGATTATTCGTTCTTTTATCAAAATAA
AAGAGCAGTATGAGGATGTACAGCGTTTTGGCAAATATCATCCTGACTATAGAGAAATATCCCGGAAAATGAGGGAGATC
AAACGTGAGCTGGACCTGAACGATAAGGTGGCTGACTTCAAGAGAGCTGAAAATGAGCTCCAGTCCATTCTTGATGAGGT
CAGCGTTGAGATTGGGACAGCTGTTTCGGAGCATGTGAAAGTTCCGACTGGGAACCCTTATTTTGACGGTTTGTCTTCAT
GCGGAGGCGGCTGCGGTTCAGGCGGAAGCTGCGGATGTAAAGTGTCCTGA
ATGTATGCGACGATGGAATCCGTGCGGCTTCAAAGTGAAGCTCAGCAGCTTGCCGAGATGATTCTGCAGTCGGAGACGGC
TGAGAACTACCGCAATTGTTACAAGCGTCTCCAGGAAGATGAAGAGGCAGGGCGGATTATTCGTTCTTTTATCAAAATAA
AAGAGCAGTATGAGGATGTACAGCGTTTTGGCAAATATCATCCTGACTATAGAGAAATATCCCGGAAAATGAGGGAGATC
AAACGTGAGCTGGACCTGAACGATAAGGTGGCTGACTTCAAGAGAGCTGAAAATGAGCTCCAGTCCATTCTTGATGAGGT
CAGCGTTGAGATTGGGACAGCTGTTTCGGAGCATGTGAAAGTTCCGACTGGGAACCCTTATTTTGACGGTTTGTCTTCAT
GCGGAGGCGGCTGCGGTTCAGGCGGAAGCTGCGGATGTAAAGTGTCCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ylbF | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |