Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   E8M05_RS04380 Genome accession   NZ_CP039457
Coordinates   814866..816743 (+) Length   625 a.a.
NCBI ID   WP_003064312.1    Uniprot ID   E0PD02
Organism   Streptococcus pasteurianus strain WUSP067     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 809866..821743
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E8M05_RS04365 (E8M05_04360) - 810525..812444 (+) 1920 WP_003064305.1 ATP-binding cassette domain-containing protein -
  E8M05_RS04370 (E8M05_04365) - 812676..813122 (+) 447 WP_003064307.1 MarR family winged helix-turn-helix transcriptional regulator -
  E8M05_RS04375 (E8M05_04370) - 813115..814866 (+) 1752 WP_003064310.1 ABC transporter ATP-binding protein -
  E8M05_RS04380 (E8M05_04375) rcrQ 814866..816743 (+) 1878 WP_003064312.1 ABC transporter ATP-binding protein Regulator
  E8M05_RS04385 (E8M05_04380) - 817226..818056 (+) 831 WP_003064317.1 MurR/RpiR family transcriptional regulator -
  E8M05_RS04390 (E8M05_04385) - 818053..818760 (+) 708 WP_136596412.1 N-acetylmannosamine-6-phosphate 2-epimerase -
  E8M05_RS04395 (E8M05_04390) - 818777..820276 (+) 1500 WP_003064322.1 PTS transporter subunit EIIC -
  E8M05_RS04400 (E8M05_04395) - 820695..821663 (+) 969 WP_013851696.1 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha -

Sequence

Protein


Download         Length: 625 a.a.        Molecular weight: 69928.58 Da        Isoelectric Point: 7.1263

>NTDB_id=317823 E8M05_RS04380 WP_003064312.1 814866..816743(+) (rcrQ) [Streptococcus pasteurianus strain WUSP067]
MAQTKKEINKQDTLKRVLAYVLKNYKWRFLLVLVLILVTALCMVRFSLFMQTLIDSYITPLLAAKNPDFSGLAHAIFQLI
IIGIIGVLSSYTYNRLMVYVGQGTMRRIRIDLFTHMERLPIKYFDTHAHGDIMSIYTNDVDTLRQLISQSIPQVINSVFS
IVVTFTSMLLLNVPLSILSLFMVVVLLSVARKIASQSSKHFHNQQNDLGRVNGFIEEMMDGQKVVKVFNHEERAKEDFRK
INQQLRYSATNANIYANILMPVSANIGHISYVLCAMLGATLALQGYAGLTLGTLVSFLALNRSFTNPITQISQQINAVIM
AMAGADRVFNLLDAEVETDEGYVELVNATEDTAGNLQEVEETTGMWAWKHPHEDGTVTYHKQEGRVTFSDVTFGYSDDKM
VLHDINLFAEPGQKIAFVGSTGAGKTTITNLINRFYDIQEGKIHYDGINIRKIKKADLRRSLGIVLQDTHLFTGTVMDNI
RYGRLNATDDECIAAAKLANAHDFIKRLPEGYDTILTGDGSNLSQGQRQLLAIARAAVANPPALILDEATSSIDTRTEVH
VQEGMDALMKGRTTFVIAHRLSTVRNADCIMVLEQGRIIERGNHDELIAQKGRYYQLYTGNAISE

Nucleotide


Download         Length: 1878 bp        

>NTDB_id=317823 E8M05_RS04380 WP_003064312.1 814866..816743(+) (rcrQ) [Streptococcus pasteurianus strain WUSP067]
ATGGCTCAAACCAAAAAAGAAATTAATAAACAAGATACGCTAAAACGTGTGTTGGCTTATGTTTTGAAAAACTATAAATG
GCGCTTCTTGCTAGTATTGGTTTTGATTTTAGTAACAGCGCTTTGTATGGTACGCTTTAGTTTGTTCATGCAAACATTGA
TTGATAGTTATATTACACCTCTTTTAGCTGCTAAAAATCCAGATTTTTCAGGGTTAGCGCACGCTATTTTCCAATTAATC
ATCATTGGTATTATTGGTGTTCTAAGTTCTTACACTTATAATCGTTTGATGGTTTATGTTGGACAAGGAACAATGCGTCG
TATTCGTATTGATTTGTTCACTCATATGGAACGCTTGCCAATCAAATACTTTGATACACATGCTCACGGTGATATCATGT
CTATCTATACTAACGACGTTGATACACTTCGTCAGTTGATTAGCCAGAGTATTCCTCAGGTCATTAATTCGGTTTTTTCG
ATTGTGGTAACATTTACAAGTATGCTTCTTTTGAATGTTCCCTTGTCAATATTATCACTTTTTATGGTTGTGGTGTTATT
ATCAGTAGCGCGTAAAATTGCTTCGCAATCGTCTAAGCATTTCCATAATCAACAAAATGACCTTGGGCGTGTCAATGGGT
TCATTGAGGAAATGATGGACGGTCAAAAAGTGGTTAAAGTTTTCAATCACGAAGAACGTGCTAAAGAAGATTTCCGAAAA
ATCAATCAACAGCTCCGCTATTCTGCTACAAATGCTAATATCTATGCTAATATTTTGATGCCAGTATCAGCTAATATTGG
ACATATTTCCTATGTGCTTTGTGCCATGCTTGGGGCAACCCTAGCTCTTCAAGGCTATGCTGGATTGACTTTGGGAACAT
TGGTTTCTTTCCTAGCGCTTAACCGTAGTTTTACAAACCCAATCACACAAATCAGTCAACAAATCAACGCAGTTATTATG
GCGATGGCTGGTGCTGATCGTGTCTTTAATCTACTTGATGCTGAAGTGGAAACAGATGAAGGTTATGTTGAATTGGTAAA
TGCTACTGAGGACACTGCTGGAAATCTTCAAGAAGTTGAAGAAACAACTGGTATGTGGGCTTGGAAACATCCACACGAAG
ACGGCACCGTAACTTATCACAAGCAAGAAGGTCGTGTAACCTTCTCAGATGTAACCTTTGGTTATAGTGATGATAAAATG
GTTTTACATGATATTAATTTGTTTGCGGAACCTGGTCAAAAAATTGCCTTTGTTGGCTCAACTGGTGCTGGTAAAACAAC
TATTACAAACTTGATTAACCGTTTTTACGATATTCAAGAAGGTAAGATTCATTACGACGGTATTAACATTCGTAAAATCA
AAAAAGCTGACCTTCGTCGTAGCTTAGGGATTGTATTGCAAGATACACACCTTTTCACAGGAACAGTTATGGATAATATC
CGTTACGGACGTTTGAATGCGACTGACGACGAATGTATTGCTGCGGCTAAGTTAGCTAATGCACATGATTTCATTAAACG
TTTGCCAGAAGGTTACGATACCATTTTGACAGGTGACGGAAGTAATTTATCTCAAGGACAACGTCAATTGCTTGCGATTG
CACGTGCAGCTGTGGCAAATCCACCTGCTTTGATTTTGGATGAAGCAACATCATCAATCGATACGCGTACCGAAGTTCAC
GTCCAAGAAGGTATGGATGCGTTGATGAAAGGTCGTACAACTTTTGTTATCGCTCACCGTTTGTCAACAGTTCGCAATGC
GGATTGTATCATGGTTCTCGAGCAAGGACGTATCATCGAACGTGGTAACCACGACGAATTGATTGCGCAAAAAGGTCGTT
ATTACCAACTTTACACAGGTAACGCCATTAGTGAATAG

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(402-551)

ABC transporter transmembrane region (ABC_membrane)

(30-307)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB E0PD02

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

39.677

99.2

0.394

Multiple sequence alignment