Detailed information NTG0317154

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: D7D50_RS09360
• Genome accession: NZ_CP032620
• Coordinates: 1869925..1870737 (-)
• Length: 270 a.a.
• NCBI ID: WP_174705370.1
• Uniprot ID: -
• Organism: Streptococcus koreensis strain KCOM 2890 (=JS71)
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1864925..1875737

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D7D50_RS09335 (D7D50_09335)	-	1865417..1866289 (-)	873	WP_120702137.1	XRE/MutR family transcriptional regulator	-
D7D50_RS09340 (D7D50_09340)	-	1866294..1866647 (-)	354	WP_117744060.1	hypothetical protein	-
D7D50_RS09345 (D7D50_09345)	-	1866678..1868582 (-)	1905	WP_120702139.1	ABC-F family ATP-binding cassette domain-containing protein	-
D7D50_RS09350 (D7D50_09350)	-	1868665..1869036 (-)	372	WP_117744058.1	hypothetical protein	-
D7D50_RS09355 (D7D50_09355)	-	1869033..1869758 (-)	726	WP_117744057.1	matrixin family metalloprotease	-
D7D50_RS09360 (D7D50_09360)	endA	1869925..1870737 (-)	813	WP_174705370.1	DNA/RNA non-specific endonuclease	Machinery gene
D7D50_RS09365 (D7D50_09365)	-	1870842..1871030 (-)	189	WP_023022752.1	DNA-directed RNA polymerase subunit beta	-
D7D50_RS09370 (D7D50_09370)	murA	1871020..1872303 (-)	1284	WP_023026629.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
D7D50_RS09375 (D7D50_09375)	-	1872370..1872600 (-)	231	WP_117744055.1	DUF1146 family protein	-
D7D50_RS09380 (D7D50_09380)	-	1872688..1873107 (-)	420	WP_120702141.1	F0F1 ATP synthase subunit epsilon	-
D7D50_RS09385 (D7D50_09385)	atpD	1873121..1874527 (-)	1407	WP_031573407.1	F0F1 ATP synthase subunit beta	-
D7D50_RS09390 (D7D50_09390)	-	1874616..1875503 (-)	888	WP_023022747.1	F0F1 ATP synthase subunit gamma	-

Sequence

Protein

• Length: 270 a.a.
• Molecular weight: 29558.01 Da
• Isoelectric Point: 9.2984

>NTDB_id=317154 D7D50_RS09360 WP_174705370.1 1869925..1870737(-) (endA) [Streptococcus koreensis strain KCOM 2890 (=JS71)]
MKKSGQTLLGLVVAAALSIGGYYFSHPQPVASHSQVQTVVTSSQQATPSKELAESVLTDGVRTKLGKNIQWNEAGAFIIN
QNKTNLDADVASLPYADTKTKTVKGREIPTVANALMTKATRQYQKREQTDVDWTPAGWHQVTNLAGEYDHAVDRGHLLGY
ALIGKLDGFDASTSNPKNIAVQTAWANQARDSFSTGQNYYETLVRKALDNNKRVRYRVTLHYASDDDLVPVGSQIEAKSS
DGSLEFNVFVPNVQSGISLDYRTGKVTVHR

Nucleotide

• Length: 813 bp

>NTDB_id=317154 D7D50_RS09360 WP_174705370.1 1869925..1870737(-) (endA) [Streptococcus koreensis strain KCOM 2890 (=JS71)]
ATGAAAAAATCGGGACAAACCTTACTAGGCTTGGTGGTGGCTGCAGCTCTCTCGATCGGCGGGTATTATTTTAGTCATCC
CCAGCCAGTCGCTAGTCACTCTCAAGTTCAAACGGTTGTCACTTCGAGTCAACAAGCAACACCGAGTAAGGAACTAGCAG
AGAGTGTTCTGACGGATGGTGTTCGTACGAAACTAGGAAAGAACATTCAATGGAACGAAGCGGGCGCTTTCATTATTAAC
CAGAACAAAACCAATCTGGATGCAGATGTTGCGAGTCTCCCTTATGCAGATACGAAGACAAAGACTGTAAAAGGACGAGA
AATCCCAACAGTTGCCAACGCTTTGATGACCAAGGCGACTCGTCAATACCAAAAGAGAGAGCAGACAGATGTAGATTGGA
CGCCAGCTGGATGGCACCAAGTAACCAATTTAGCTGGGGAATATGACCATGCGGTTGATCGGGGACACCTTCTCGGCTAT
GCCTTGATTGGCAAGCTTGATGGCTTTGATGCCTCAACGAGCAATCCAAAAAATATAGCGGTTCAAACAGCTTGGGCGAA
TCAAGCGCGTGATAGTTTTTCGACAGGACAAAATTACTATGAGACCCTTGTTCGGAAGGCCTTAGACAATAATAAGCGGG
TTCGTTATCGGGTGACTCTCCACTATGCATCGGATGATGATTTGGTACCAGTCGGCAGTCAAATTGAAGCAAAATCTAGT
GATGGTAGTCTAGAGTTTAATGTTTTTGTTCCAAATGTTCAGAGTGGGATTAGTTTGGATTATCGTACGGGAAAAGTAAC
AGTGCATCGTTAA

Domains

Predicted by InterproScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (75-242)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Streptococcus pneumoniae Rx1	66.912	100	0.674
endA	Streptococcus pneumoniae D39	66.912	100	0.674
endA	Streptococcus pneumoniae R6	66.912	100	0.674
endA	Streptococcus pneumoniae TIGR4	66.912	100	0.674