Detailed information NTG0313419

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: A320_RS10460
• Genome accession: NZ_CP032055
• Coordinates: 2202288..2202989 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain A320 (RUH134)
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2197288..2207989

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A320_RS10430 (A320_02057)	-	2197594..2198037 (-)	444	WP_001246675.1	SRPBCC family protein	-
A320_RS10435 (A320_02058)	tadA	2198107..2198610 (-)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
A320_RS10440 (A320_02059)	-	2198617..2199741 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
A320_RS10445 (A320_02060)	ung	2199738..2200451 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
A320_RS10450 (A320_02061)	-	2200502..2201098 (-)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
A320_RS10455 (A320_02062)	gspK	2201329..2202288 (-)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
A320_RS10460 (A320_02063)	xcpW	2202288..2202989 (-)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
A320_RS10465 (A320_02064)	xcpV	2202989..2203369 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
A320_RS10470 (A320_02065)	-	2203359..2203913 (-)	555	WP_000841373.1	type II secretion system protein	-
A320_RS10475 (A320_02066)	-	2203923..2204531 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
A320_RS10480 (A320_02067)	-	2204569..2205342 (-)	774	WP_000497298.1	TatD family hydrolase	-
A320_RS10485 (A320_02068)	-	2205360..2205701 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
A320_RS10490 (A320_02069)	-	2205713..2206693 (-)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
A320_RS10495 (A320_02070)	kdsB	2206705..2207466 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=313419 A320_RS10460 WP_000594589.1 2202288..2202989(-) (xcpW) [Acinetobacter baumannii strain A320 (RUH134)]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=313419 A320_RS10460 WP_000594589.1 2202288..2202989(-) (xcpW) [Acinetobacter baumannii strain A320 (RUH134)]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996