Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilN   Type   Machinery gene
Locus tag   AhaeAN4_RS01380 Genome accession   NZ_CP031979
Coordinates   296132..296776 (+) Length   214 a.a.
NCBI ID   WP_004641325.1    Uniprot ID   N9GL44
Organism   Acinetobacter haemolyticus strain AN4     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 291132..301776
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AhaeAN4_RS01365 (AhaeAN4_01385) - 291472..292290 (+) 819 WP_004641331.1 putative RNA methyltransferase -
  AhaeAN4_RS01370 (AhaeAN4_01390) ponA 292319..294910 (-) 2592 WP_004641329.1 penicillin-binding protein PBP1a -
  AhaeAN4_RS01375 (AhaeAN4_01395) comM 295110..296132 (+) 1023 WP_026056300.1 pilus assembly protein PilM Machinery gene
  AhaeAN4_RS01380 (AhaeAN4_01400) pilN 296132..296776 (+) 645 WP_004641325.1 PilN domain-containing protein Machinery gene
  AhaeAN4_RS01385 (AhaeAN4_01405) pilO 296773..297483 (+) 711 WP_008941136.1 type 4a pilus biogenesis protein PilO Machinery gene
  AhaeAN4_RS01390 (AhaeAN4_01410) pilP 297483..298010 (+) 528 WP_005088514.1 pilus assembly protein PilP Machinery gene
  AhaeAN4_RS01395 (AhaeAN4_01415) pilQ 298072..300204 (+) 2133 WP_171479087.1 type IV pilus secretin PilQ family protein Machinery gene
  AhaeAN4_RS01400 (AhaeAN4_01420) aroK 300243..300785 (+) 543 WP_005087029.1 shikimate kinase AroK -

Sequence


Protein


Download         Length: 214 a.a.        Molecular weight: 23956.37 Da        Isoelectric Point: 6.0102

>NTDB_id=313071 AhaeAN4_RS01380 WP_004641325.1 296132..296776(+) (pilN) [Acinetobacter haemolyticus strain AN4]
MAKINLLPWRDELREQRKKQFIAFCVGVAALGIASVFTAWMYFDHKLNDQEQANQFIVSTNQNLDVQLKSLEGLQERRNA
IIERMKLIQGLQGQRPVIVRLVDELVRVTPPTMYITKFTRTGDKFTIEGKAESPNTVAELLRNLEASPWYRNAFMNSFLA
SEEKKDKAVSSLVPRVEENYGSFVVTVDLGEIGTTVTTDPASESAASVTVGGAQ

Nucleotide


Download         Length: 645 bp        

>NTDB_id=313071 AhaeAN4_RS01380 WP_004641325.1 296132..296776(+) (pilN) [Acinetobacter haemolyticus strain AN4]
ATGGCAAAGATTAACTTACTCCCTTGGCGTGATGAGCTAAGAGAACAAAGAAAGAAACAATTTATTGCATTTTGTGTTGG
GGTGGCTGCTTTAGGAATCGCATCTGTATTTACAGCATGGATGTATTTTGATCACAAGCTGAATGATCAAGAACAAGCAA
ACCAGTTTATTGTGAGTACCAATCAAAACTTAGATGTTCAACTGAAGTCATTAGAGGGATTGCAAGAGCGTCGCAATGCG
ATTATTGAACGCATGAAGTTGATTCAAGGACTGCAAGGACAACGACCAGTCATTGTACGTTTGGTTGATGAGTTGGTGCG
TGTAACCCCTCCAACAATGTACATCACTAAGTTTACGCGTACAGGTGATAAATTTACCATCGAAGGAAAAGCAGAGAGTC
CAAATACCGTTGCCGAGCTGTTACGAAATTTGGAAGCTTCACCTTGGTATCGTAACGCATTTATGAATTCGTTTTTGGCA
TCAGAAGAGAAAAAAGATAAAGCCGTTAGCTCTTTAGTTCCTCGTGTCGAAGAAAATTATGGCAGTTTCGTTGTTACTGT
AGACTTGGGTGAAATTGGAACCACGGTGACAACTGATCCTGCTTCAGAATCAGCTGCATCAGTAACAGTGGGAGGCGCAC
AATGA

Domains


Predicted by InterproScan.

(100-167)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB N9GL44

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilN Acinetobacter baumannii D1279779

78.972

100

0.79

  comN Acinetobacter baylyi ADP1

71.905

98.131

0.706


Multiple sequence alignment