Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | D1E86_RS08250 | Genome accession | NZ_CP031888 |
| Coordinates | 1649814..1650113 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain CFSAN082782 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1644814..1655113
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D1E86_RS08225 (D1E86_08405) | gcvPA | 1646026..1647372 (-) | 1347 | WP_149557709.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| D1E86_RS08230 (D1E86_08410) | gcvT | 1647392..1648483 (-) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| D1E86_RS08235 (D1E86_08415) | - | 1648642..1649166 (-) | 525 | WP_001015117.1 | shikimate kinase | - |
| D1E86_RS08240 (D1E86_08420) | - | 1649156..1649302 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| D1E86_RS08245 (D1E86_08425) | comGF | 1649399..1649896 (-) | 498 | WP_001789864.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| D1E86_RS08250 (D1E86_08430) | comGE | 1649814..1650113 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| D1E86_RS08255 (D1E86_08435) | comGD | 1650100..1650546 (-) | 447 | WP_001791635.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| D1E86_RS08260 (D1E86_08440) | comGC | 1650524..1650835 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| D1E86_RS08265 (D1E86_08445) | comGB | 1650849..1651919 (-) | 1071 | WP_000775708.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| D1E86_RS08270 (D1E86_08450) | comGA | 1651891..1652865 (-) | 975 | WP_000697228.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| D1E86_RS08275 (D1E86_08455) | - | 1652917..1653540 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| D1E86_RS08280 (D1E86_08460) | - | 1653537..1653866 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| D1E86_RS08285 (D1E86_08465) | - | 1653866..1654852 (-) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| D1E86_RS08290 (D1E86_08470) | - | 1654849..1655052 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=312452 D1E86_RS08250 WP_000844413.1 1649814..1650113(-) (comGE) [Staphylococcus aureus strain CFSAN082782]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=312452 D1E86_RS08250 WP_000844413.1 1649814..1650113(-) (comGE) [Staphylococcus aureus strain CFSAN082782]
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |