Detailed information NTG0310923

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: D0S48_RS00510
• Genome accession: NZ_CP031739
• Coordinates: 108117..110552 (+)
• Length: 811 a.a.
• NCBI ID: WP_144535785.1
• Uniprot ID: -
• Organism: Psychrobacillus sp. AK 1817
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 103117..115552

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D0S48_RS00490 (D0S48_00490)	cymR	104717..105139 (+)	423	WP_144535777.1	cysteine metabolism transcriptional regulator CymR	-
D0S48_RS00495 (D0S48_00495)	-	105157..106290 (+)	1134	WP_151109364.1	cysteine desulfurase family protein	-
D0S48_RS00500 (D0S48_00500)	mnmA	106307..107422 (+)	1116	WP_151109366.1	tRNA 2-thiouridine(34) synthase MnmA	-
D0S48_RS00505 (D0S48_00505)	-	107437..108093 (+)	657	WP_186318049.1	lipopolysaccharide assembly protein LapB	-
D0S48_RS00510 (D0S48_00510)	recD2	108117..110552 (+)	2436	WP_144535785.1	ATP-dependent RecD-like DNA helicase	Machinery gene
D0S48_RS00515 (D0S48_00515)	alaS	110851..113484 (+)	2634	WP_144535787.1	alanine--tRNA ligase	-
D0S48_RS00520 (D0S48_00520)	-	113561..113827 (+)	267	WP_053588802.1	IreB family regulatory phosphoprotein	-
D0S48_RS00525 (D0S48_00525)	ruvX	113830..114249 (+)	420	WP_144535789.1	Holliday junction resolvase RuvX	-
D0S48_RS00530 (D0S48_00530)	-	114261..114554 (+)	294	WP_144535791.1	DUF1292 domain-containing protein	-

Sequence

Protein

• Length: 811 a.a.
• Molecular weight: 91113.49 Da
• Isoelectric Point: 5.3737

>NTDB_id=310923 D0S48_RS00510 WP_144535785.1 108117..110552(+) (recD2) [Psychrobacillus sp. AK 1817]
MTNEMINNEKQFIAGRPIVSIFHNPQNLFSIIKLKVKSTNTVYKEKEIIVTGYFPPLVLEEAYKFTGYIKNHPKYGVQFQ
VETFQKEVPATETGIVHYLSSDMFPGIGRKTAEQIVKKLGENAINRILDDPSALDIIPRLAEEKKQTIRATLEQNLGLEK
VMIQLNEWGFGPQIAMKIYQVYREETISKLTDNPYRLIEDVEGVGFVRADELGYKLGIKGNHPDRIKAAIYHLLQSSSLS
EGHVFQYAEQLLEDVKRMLENAQREEISYDAITKCCIELAEESRIVGEVNRFYIPSLYFSEVGISSKVETLLTEKDLHHF
PLSEIKKHLGALEERLGVQYAKTQIKAIETALNSTITLLTGGPGTGKTTVVRGIVELYAELHGLSLDPKEWAKEQKPFPI
VLAAPTGRAAKRLSESTELPAMTIHRLLGFNGQEDNDTEGKEIEGRLVIIDETSMLDTWLGHQLLKAIPKDAQVIFVGDQ
DQLPPVGPGQVLKDLLACKRIPTVELVDIYRQSEGSSIIELAHEMKKGSVPATLTAKTKDRSFIKASPEQIPKVVEQVLK
AALSKGQSIREIQVLAPMYRGPAGIDTLNKMIQEMVNPNPDGTRKEMTFGETIYRIGDKVLQLVNQPESNVFNGDMGEVV
ALFKANETVEKKEMLVVSFDGNEVTYEKNDLNQITLAYCCSVHKSQGSEFQTVIMPVTRSYMKMLRRNLLYTGITRAKNF
LILCGDPEVFTFGVKRTDDLQRLTTLKERLADEETVEDAKSIAEEIEAKEVTSQSTHDDLVTTYLSSDNYHSIDPMIGMK
GINPYQFLDSD

Nucleotide

• Length: 2436 bp

>NTDB_id=310923 D0S48_RS00510 WP_144535785.1 108117..110552(+) (recD2) [Psychrobacillus sp. AK 1817]
ATGACAAATGAAATGATTAATAATGAAAAGCAATTTATTGCTGGTCGACCAATCGTCTCTATTTTTCATAATCCCCAAAA
CCTATTCTCCATCATTAAATTAAAAGTAAAATCAACAAATACCGTATATAAGGAGAAAGAAATAATTGTAACTGGTTATT
TTCCTCCATTGGTTTTGGAAGAGGCATATAAATTTACTGGTTATATTAAAAATCATCCTAAGTATGGGGTTCAGTTTCAG
GTAGAAACTTTTCAAAAAGAAGTTCCTGCTACTGAGACAGGTATAGTCCATTATCTTTCAAGTGATATGTTTCCTGGAAT
AGGGAGAAAGACTGCTGAGCAGATTGTGAAAAAGCTTGGAGAAAATGCTATCAATCGAATTTTAGATGACCCTTCTGCAT
TGGATATTATTCCAAGGTTGGCAGAGGAAAAGAAGCAGACAATCAGAGCTACCTTAGAGCAAAATCTAGGCTTGGAAAAA
GTAATGATTCAGCTAAATGAATGGGGCTTCGGTCCGCAAATAGCGATGAAAATCTATCAGGTCTATAGAGAAGAAACAAT
CTCTAAACTAACTGATAATCCATATCGTTTAATAGAGGATGTGGAGGGTGTTGGTTTTGTTCGTGCTGATGAGCTAGGCT
ATAAGCTTGGGATAAAAGGAAATCATCCGGACCGCATAAAAGCTGCTATCTACCATTTACTTCAATCATCTTCACTGAGT
GAGGGACATGTTTTTCAATATGCTGAGCAACTTCTTGAAGACGTTAAAAGAATGCTTGAAAATGCCCAAAGAGAAGAAAT
CTCTTATGATGCTATAACCAAATGCTGTATTGAACTCGCAGAGGAAAGCCGTATTGTTGGGGAAGTTAACCGATTTTATA
TTCCTTCTCTATATTTTTCAGAGGTGGGTATCAGTTCGAAAGTGGAAACCTTGCTAACAGAAAAGGACCTTCATCATTTT
CCGTTGTCGGAGATTAAAAAGCATTTAGGGGCATTAGAGGAGCGCTTAGGTGTTCAATATGCAAAAACACAAATTAAGGC
GATTGAAACAGCTCTGAACTCTACTATAACTCTTTTAACGGGAGGGCCTGGAACCGGGAAAACGACTGTTGTCAGAGGAA
TCGTAGAGCTCTATGCAGAGCTACATGGACTTTCCTTAGATCCAAAAGAATGGGCGAAAGAACAAAAGCCGTTTCCTATT
GTCCTGGCAGCTCCTACAGGGAGAGCTGCAAAGCGTTTAAGTGAATCGACCGAGCTACCAGCTATGACGATTCATAGACT
ACTCGGTTTTAATGGGCAAGAAGATAATGATACAGAAGGCAAAGAGATTGAAGGTAGATTAGTAATTATCGATGAGACTT
CCATGCTAGACACGTGGCTAGGGCATCAGCTCTTAAAGGCAATCCCCAAAGACGCTCAAGTCATATTTGTAGGTGACCAA
GATCAGTTGCCACCTGTTGGTCCGGGTCAGGTATTAAAGGATCTACTGGCTTGTAAAAGGATACCTACAGTGGAGCTTGT
CGATATTTATCGTCAATCTGAAGGGTCCTCAATTATTGAGCTAGCACACGAGATGAAAAAAGGAAGTGTGCCTGCAACTC
TAACTGCGAAAACTAAGGATCGCTCATTCATCAAGGCTTCTCCGGAACAAATTCCTAAAGTAGTAGAACAAGTCTTGAAA
GCAGCATTATCGAAGGGACAATCCATCCGAGAAATTCAGGTTCTAGCTCCTATGTATCGTGGACCGGCTGGGATTGACAC
GCTAAATAAGATGATTCAAGAAATGGTCAATCCAAATCCAGACGGTACAAGAAAAGAGATGACCTTCGGAGAAACTATTT
ATCGGATAGGAGATAAAGTACTTCAGCTGGTCAACCAACCAGAAAGTAATGTCTTTAATGGTGATATGGGTGAGGTAGTG
GCTCTTTTTAAAGCAAACGAAACAGTGGAAAAGAAAGAGATGCTAGTCGTATCATTTGATGGCAATGAAGTAACATATGA
AAAAAATGATTTGAATCAAATTACTCTTGCCTATTGTTGCTCTGTCCATAAGTCACAAGGCAGTGAATTCCAAACGGTTA
TTATGCCGGTTACTAGAAGCTATATGAAAATGCTTAGACGCAATTTGTTGTATACAGGTATAACAAGAGCAAAAAACTTT
TTAATTCTTTGTGGCGATCCGGAAGTTTTTACTTTTGGAGTGAAACGAACGGATGATTTACAGCGTTTAACAACGTTAAA
GGAACGTCTTGCGGACGAAGAAACAGTAGAAGATGCAAAATCAATAGCTGAAGAAATAGAAGCAAAAGAAGTTACAAGTC
AATCTACGCATGATGATTTAGTCACTACTTATTTATCCTCAGACAATTATCATTCGATTGACCCAATGATTGGCATGAAG
GGTATAAATCCCTATCAGTTCTTAGATTCGGATTGA

Domains

Predicted by InterproScan.

• UvrD-like helicase C-terminal domain (UvrD_C_2) (677-724)

• Helix-hairpin-helix containing domain (HHH_RecD2) (157-245)

• AAA domain (AAA_30) (340-546)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (588-659)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	54.715	99.383	0.544