Detailed information
Bioinformatically predicted
Overview
| Name | pilF | Type | Machinery gene |
| Locus tag | APP7_RS06735 | Genome accession | NC_010939 |
| Coordinates | 1481682..1482230 (-) | Length | 182 a.a. |
| NCBI ID | WP_005617759.1 | Uniprot ID | B3H245 |
| Organism | Actinobacillus pleuropneumoniae serovar 7 str. AP76 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1476682..1487230
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| APP7_RS06720 (APP7_1320) | - | 1477166..1477687 (+) | 522 | WP_005598290.1 | SprT family zinc-dependent metalloprotease | - |
| APP7_RS06725 (APP7_1321) | - | 1477792..1479078 (+) | 1287 | WP_005617755.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| APP7_RS06730 (APP7_1322) | - | 1479268..1481607 (-) | 2340 | WP_005617757.1 | Tex family protein | - |
| APP7_RS06735 (APP7_1323) | pilF | 1481682..1482230 (-) | 549 | WP_005617759.1 | type IV pilus biogenesis/stability protein PilW | Machinery gene |
| APP7_RS06740 (APP7_1325) | - | 1482284..1483466 (-) | 1183 | Protein_1322 | bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN | - |
| APP7_RS06765 (APP7_1326) | gltX | 1484371..1485810 (+) | 1440 | WP_005605060.1 | glutamate--tRNA ligase | - |
| APP7_RS06775 | yefM | 1486148..1486399 (+) | 252 | WP_017357689.1 | YoeB-YefM toxin-antitoxin system antitoxin YefM | - |
| APP7_RS06780 | - | 1486396..1486656 (+) | 261 | WP_017357690.1 | Txe/YoeB family addiction module toxin | - |
| APP7_RS06785 (APP7_1327) | - | 1486815..1486982 (-) | 168 | WP_005598320.1 | Trm112 family protein | - |
Sequence
Protein
Download Length: 182 a.a. Molecular weight: 20645.27 Da Isoelectric Point: 6.9479
>NTDB_id=31078 APP7_RS06735 WP_005617759.1 1481682..1482230(-) (pilF) [Actinobacillus pleuropneumoniae serovar 7 str. AP76]
MNLAKFLRNLTACMLLSVLFGCSSQLPTSQTTFNRSEAVKARINLALAYLDQHDLPKAKENIDKALSHDQNDYLPHSVLA
YYYQQIGDQVHAEQAYQQALKSSDNRPDVLNNYGTFLCKQAKFDQAYQQFEQAVKSEQPYYHQADSLENIVLCAKQEPNL
AKVNEALSQLEKLDKSRAAALR
MNLAKFLRNLTACMLLSVLFGCSSQLPTSQTTFNRSEAVKARINLALAYLDQHDLPKAKENIDKALSHDQNDYLPHSVLA
YYYQQIGDQVHAEQAYQQALKSSDNRPDVLNNYGTFLCKQAKFDQAYQQFEQAVKSEQPYYHQADSLENIVLCAKQEPNL
AKVNEALSQLEKLDKSRAAALR
Nucleotide
Download Length: 549 bp
>NTDB_id=31078 APP7_RS06735 WP_005617759.1 1481682..1482230(-) (pilF) [Actinobacillus pleuropneumoniae serovar 7 str. AP76]
ATGAACCTTGCAAAATTTTTGCGAAATTTGACCGCTTGTATGCTGTTATCCGTGTTGTTCGGTTGTTCTTCTCAGCTTCC
TACCTCTCAAACCACGTTTAATCGCTCGGAAGCGGTTAAAGCGCGTATCAATTTAGCCTTAGCGTATCTCGATCAACATG
ATTTACCCAAAGCGAAAGAGAATATTGATAAAGCGCTAAGCCATGATCAAAACGACTACTTACCTCACTCCGTTTTAGCT
TATTACTATCAGCAAATCGGTGATCAAGTTCATGCGGAACAGGCTTATCAGCAAGCATTGAAATCAAGTGATAATCGTCC
GGATGTCTTAAATAATTACGGAACTTTTCTGTGTAAACAAGCCAAATTTGATCAGGCATATCAGCAGTTTGAGCAAGCGG
TGAAAAGCGAACAACCTTATTATCATCAAGCCGATAGCCTCGAAAATATCGTGTTATGTGCCAAACAAGAGCCGAATTTA
GCTAAAGTAAACGAAGCGTTAAGCCAATTAGAAAAGCTGGATAAATCAAGAGCGGCGGCACTACGCTAG
ATGAACCTTGCAAAATTTTTGCGAAATTTGACCGCTTGTATGCTGTTATCCGTGTTGTTCGGTTGTTCTTCTCAGCTTCC
TACCTCTCAAACCACGTTTAATCGCTCGGAAGCGGTTAAAGCGCGTATCAATTTAGCCTTAGCGTATCTCGATCAACATG
ATTTACCCAAAGCGAAAGAGAATATTGATAAAGCGCTAAGCCATGATCAAAACGACTACTTACCTCACTCCGTTTTAGCT
TATTACTATCAGCAAATCGGTGATCAAGTTCATGCGGAACAGGCTTATCAGCAAGCATTGAAATCAAGTGATAATCGTCC
GGATGTCTTAAATAATTACGGAACTTTTCTGTGTAAACAAGCCAAATTTGATCAGGCATATCAGCAGTTTGAGCAAGCGG
TGAAAAGCGAACAACCTTATTATCATCAAGCCGATAGCCTCGAAAATATCGTGTTATGTGCCAAACAAGAGCCGAATTTA
GCTAAAGTAAACGAAGCGTTAAGCCAATTAGAAAAGCTGGATAAATCAAGAGCGGCGGCACTACGCTAG
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilF | Glaesserella parasuis strain SC1401 |
66.489 |
100 |
0.687 |
| pilF/pilF2 | Haemophilus influenzae Rd KW20 |
46.199 |
93.956 |
0.434 |