Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   BEN71_RS14865 Genome accession   NZ_CP031716
Coordinates   2985837..2990312 (-) Length   1491 a.a.
NCBI ID   WP_068975228.1    Uniprot ID   -
Organism   Acinetobacter wuhouensis strain WCHA60     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 2980837..2995312
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BEN71_RS14840 (BEN71_14840) - 2982148..2982543 (-) 396 WP_068975238.1 YbaN family protein -
  BEN71_RS14845 (BEN71_14845) - 2982776..2983630 (+) 855 WP_068975239.1 DUF1853 family protein -
  BEN71_RS14850 (BEN71_14850) - 2983827..2983967 (+) 141 WP_068975225.1 entericidin A/B family lipoprotein -
  BEN71_RS14855 (BEN71_14855) dapE 2984121..2985257 (+) 1137 WP_068975226.1 succinyl-diaminopimelate desuccinylase -
  BEN71_RS14860 (BEN71_14860) - 2985364..2985828 (-) 465 WP_068975227.1 hypothetical protein -
  BEN71_RS14865 (BEN71_14865) chpA 2985837..2990312 (-) 4476 WP_068975228.1 Hpt domain-containing protein Regulator
  BEN71_RS14870 (BEN71_14870) - 2990451..2992520 (-) 2070 WP_068975229.1 methyl-accepting chemotaxis protein -
  BEN71_RS14875 (BEN71_14875) - 2992563..2993099 (-) 537 WP_068975230.1 chemotaxis protein CheW -
  BEN71_RS14880 (BEN71_14880) - 2993103..2993471 (-) 369 WP_068975231.1 PleD family two-component system response regulator -
  BEN71_RS14885 (BEN71_14885) pilG 2993492..2993875 (-) 384 WP_004827613.1 twitching motility response regulator PilG Regulator
  BEN71_RS14890 (BEN71_14890) - 2994158..2994796 (+) 639 WP_068975232.1 hypothetical protein -

Sequence


Protein


Download         Length: 1491 a.a.        Molecular weight: 168518.99 Da        Isoelectric Point: 4.3593

>NTDB_id=310689 BEN71_RS14865 WP_068975228.1 2985837..2990312(-) (chpA) [Acinetobacter wuhouensis strain WCHA60]
MKEILKHLVENVTLPEDTYLDQDEEILDFFVEELEDIFEQLQISLDLWQKEASKDAELVNVRRYFHTLKGSGRMVGAKSS
GELAWTVEDTLNRVIANNLELNTEIQQYVSTVFNIYKFKLFSEFLNKQPHHLNLAPLVLLGQQLQQKISLEPALEDLLSL
ATTLNSADVVTGLEIASVEVVAPTESTEVEAIVAQESVYVDAVATTDENFNSETLAIFVEESEEHLATINEFLHLEQHTP
DQYNRLIRALHTLRGSSSMAHVDDVFEASSKVEHLFKVLVQEDTESSKNENTLLTHYAEFVSDYLHILKQKGGESSELHN
IYQKFNDAWDRYDFQHQYQQDQDSQVGLVTQLVDLEIDLLLDAEFEFDKRAPVEHPVYFQSLSQQTQLLIEHTNNRASQG
IHDFSVQLKEAYERVIANPALLNTDYAYEIFDKVHQEFIHLFDTLASGQRVSLTDEVKETLVELHDYLLQEIDVNVELDA
VESAQPEVATQPSGSIESAGRYVFAEINKDKQSIDSDLSQREFDMDVLDIFIEEADELSDGMDQDLNTWSENPGDTTALN
NLMRYLHTLKGGANMVQANNIGLIAHELETIYERIIKGQLQATPQIIESIRLIQDDIADRIQLIREKSIDYPADHILAVL
KNIDQQRPAESTSAYDESDTAKQQFVNDSADVEEIEHVEDDIVTAIEHIAENDHVAESIQVVDVESLFDSSSDLDPADIV
ARETFIEEARELIDDGLKNLSQWFEQRSNRSLLLQLQRIAHSLKGGAKMVHLEQVAEIAYELENAFEQFGLHNFNSNVYD
GLLERTFRWLDAAIFKRDYENFDGLKSNLHGIEYVDVSAQLPEKLARTNLLFEQASNEFVQGDGTEPPSMLGEWDQSEKA
EASNEMIRISADLVEKMIDLSGENAINRSRIEMDLGQLGTTLTDMELAIQRLADQLRRMEGELESQIIAKHGDFNSRYTD
FDPLEMDQYSSLNQLSKSLAESASDLVDFKTTLSDKIRDTEGLLLQQSRIQAEIQESLMRTRLVPFSRLLPRLQRLVRQT
ASTVNKPTELLVNNTEGELDRNILEKLVSPLEHMLRNAIDHGIEDTEQRQKLGKSLTGRIELNISRQGTDVLVSFNDDGK
GIDPDVIRAKAREKGLLKADQQLEPNEILQFIFHPGFSTAQQVTQISGRGVGLDVVQSEIKSLGGQVVVSSELGKGSTFT
IRVPTTVAVSDALMVKVGDQQFAVPLSQIDRIVRISPTALEEYFETQNDYFDIDFQSYKLRYLGEFTANQKTPRLHGIAH
SLPVLLIKGNMGQSIAILVDQLIGSRSQIVVKPIGKQFAAINAIAGATILGDGQVCLILDGQNIARQVQSSTRGGAEQLQ
QDKQRHRDQRRLIMIVDDSVTVRKVTTRLLERQGFDVITAKDGVDAIEQLENVKPDLMLLDIEMPRMDGFEVTNLVRHHE
VHRDLPIIMITSRTGEKHRERAFSLGVTNYMGKPFQEADLLQNIDALLTVK

Nucleotide


Download         Length: 4476 bp        

>NTDB_id=310689 BEN71_RS14865 WP_068975228.1 2985837..2990312(-) (chpA) [Acinetobacter wuhouensis strain WCHA60]
ATGAAAGAAATATTAAAACATTTAGTGGAAAACGTCACTTTACCTGAAGATACTTATCTTGATCAGGACGAAGAAATTTT
AGATTTTTTTGTAGAAGAGCTCGAAGATATTTTTGAACAGTTACAAATCTCTCTGGATTTATGGCAAAAAGAAGCATCTA
AAGATGCCGAACTCGTCAATGTACGTCGCTATTTCCATACGCTTAAAGGGTCTGGGCGAATGGTCGGAGCTAAAAGTTCT
GGGGAATTGGCTTGGACTGTTGAAGACACATTAAACCGTGTGATTGCAAATAATTTAGAGCTGAATACTGAGATTCAACA
ATATGTCAGTACAGTATTTAATATTTATAAATTCAAACTTTTTTCTGAATTTTTAAATAAGCAGCCTCATCATTTGAATT
TGGCACCATTGGTATTGTTAGGTCAGCAATTACAGCAAAAAATAAGTTTAGAACCTGCTTTAGAAGATTTATTAAGTTTA
GCAACAACACTTAATAGTGCTGATGTGGTGACTGGTTTAGAAATTGCTAGTGTTGAGGTGGTGGCACCAACTGAGTCAAC
TGAAGTTGAAGCTATTGTTGCTCAAGAATCTGTATATGTTGATGCAGTTGCAACAACTGATGAGAATTTCAATTCTGAAA
CTTTAGCGATTTTTGTTGAAGAATCAGAAGAGCACTTGGCAACGATCAATGAATTCTTGCATTTAGAACAACATACGCCT
GATCAGTATAACCGCTTGATTCGTGCATTACATACACTACGTGGAAGTTCTTCCATGGCGCATGTGGACGATGTATTTGA
GGCGAGTAGTAAAGTTGAGCATCTCTTTAAAGTATTGGTTCAAGAAGATACAGAATCATCGAAAAATGAAAATACTTTAT
TGACCCATTATGCTGAGTTTGTAAGCGATTATTTACATATTCTTAAGCAGAAAGGCGGGGAGAGTTCAGAGTTACACAAC
ATTTATCAAAAATTCAATGATGCATGGGATCGTTATGACTTCCAACATCAATACCAACAAGATCAGGATTCACAAGTGGG
CTTAGTTACGCAGCTTGTCGATTTGGAAATTGATCTATTATTGGATGCTGAATTTGAGTTTGATAAGCGTGCGCCTGTTG
AACATCCTGTTTATTTTCAAAGCCTGAGTCAGCAAACTCAGTTGTTGATAGAACATACCAATAATCGTGCGTCTCAAGGT
ATTCATGATTTTAGTGTTCAATTAAAAGAAGCGTATGAGCGAGTTATTGCAAATCCTGCTCTACTGAATACAGATTATGC
TTATGAAATTTTTGATAAAGTACATCAAGAGTTTATTCATTTATTTGATACTTTGGCTTCAGGACAGCGTGTTAGTTTAA
CAGATGAAGTAAAAGAGACCTTAGTTGAATTGCATGACTATTTACTTCAAGAAATTGATGTCAATGTAGAGCTTGATGCG
GTTGAATCGGCGCAACCAGAAGTTGCTACGCAGCCGAGTGGTTCAATTGAATCTGCTGGTCGTTATGTTTTTGCAGAAAT
TAATAAAGATAAACAATCTATTGACTCAGATTTGAGTCAACGTGAATTCGATATGGATGTTTTAGACATTTTTATTGAGG
AAGCGGATGAATTGTCGGATGGTATGGATCAGGATTTAAATACTTGGTCTGAGAATCCTGGAGATACAACGGCTTTAAAT
AACTTGATGCGTTATTTGCACACTTTAAAAGGTGGCGCAAATATGGTTCAAGCCAATAATATTGGTTTAATTGCGCATGA
ATTAGAAACAATCTATGAGCGAATCATCAAAGGTCAATTACAAGCAACGCCACAAATTATTGAGTCAATCCGTTTGATTC
AAGATGACATTGCTGACCGAATTCAATTGATTCGTGAAAAATCAATTGATTATCCAGCAGATCATATTTTAGCAGTGCTG
AAAAATATTGATCAACAACGTCCAGCGGAAAGTACATCTGCTTATGATGAATCAGATACAGCGAAGCAACAGTTTGTAAA
TGATTCAGCTGATGTTGAAGAAATTGAGCATGTGGAAGATGATATTGTTACTGCAATTGAACATATTGCGGAAAATGATC
ATGTTGCTGAGAGTATTCAAGTTGTTGATGTAGAATCGCTTTTTGATTCAAGTTCAGATTTAGATCCAGCGGATATCGTT
GCACGTGAAACCTTCATTGAAGAAGCTCGTGAGTTAATTGATGATGGTTTAAAGAATTTATCTCAATGGTTTGAACAACG
CAGTAATCGTAGTTTATTACTTCAATTACAACGTATTGCACACAGCTTAAAAGGTGGTGCAAAAATGGTGCATTTAGAGC
AAGTTGCAGAAATTGCTTATGAGCTTGAGAATGCTTTCGAACAATTCGGTTTACATAATTTTAACTCGAATGTTTATGAT
GGTTTGTTGGAAAGAACATTCCGTTGGTTAGATGCAGCAATTTTCAAACGTGACTATGAAAATTTTGATGGATTAAAATC
AAATTTACATGGTATTGAATATGTTGATGTTTCTGCACAACTGCCTGAGAAGTTGGCACGTACCAATTTACTGTTTGAAC
AAGCGAGTAATGAATTCGTCCAAGGGGATGGTACTGAGCCACCATCAATGTTGGGTGAATGGGATCAATCAGAGAAGGCG
GAAGCCAGCAATGAGATGATCCGTATATCTGCTGATTTGGTCGAGAAAATGATTGACCTTTCAGGTGAGAATGCGATTAA
CCGTTCACGTATTGAAATGGATCTCGGTCAGTTAGGCACAACACTGACTGATATGGAGTTGGCAATACAACGTTTGGCAG
ATCAGTTACGTCGAATGGAAGGTGAGCTAGAAAGTCAAATTATTGCCAAACATGGTGATTTTAACTCGCGCTATACTGAC
TTTGACCCATTGGAAATGGACCAATATTCGTCATTAAACCAATTATCAAAATCATTGGCAGAATCAGCATCGGATTTGGT
CGACTTCAAAACGACTTTGTCGGATAAGATTCGTGATACTGAAGGTTTATTATTACAACAGTCACGTATTCAAGCTGAAA
TTCAAGAAAGTTTGATGCGTACCCGTCTGGTACCATTCTCACGACTATTGCCACGTTTGCAACGTTTAGTACGTCAAACT
GCATCTACAGTAAATAAGCCAACAGAATTGTTAGTGAATAATACTGAAGGCGAGTTGGATCGTAATATCTTAGAAAAACT
GGTTTCACCGCTTGAGCATATGCTTCGTAACGCGATTGACCACGGAATTGAAGATACGGAACAGCGTCAGAAACTTGGTA
AGTCATTGACTGGTCGTATTGAGTTGAACATTAGCCGTCAAGGTACTGATGTATTAGTATCATTCAATGATGATGGTAAA
GGTATTGATCCAGATGTTATTCGTGCTAAAGCGCGTGAAAAAGGTCTGTTGAAAGCGGATCAGCAACTCGAACCGAATGA
AATTTTACAATTCATTTTCCATCCTGGTTTCAGTACAGCACAACAAGTGACGCAAATTTCTGGTCGTGGTGTCGGTCTAG
ACGTTGTGCAAAGTGAGATTAAGTCACTGGGTGGTCAGGTCGTTGTAAGCTCAGAACTTGGCAAAGGTTCAACCTTTACA
ATCCGCGTGCCTACAACTGTTGCGGTTAGTGATGCTTTGATGGTAAAAGTTGGCGATCAACAATTTGCTGTTCCATTATC
ACAAATTGATCGTATTGTTCGAATTTCTCCAACAGCGTTGGAAGAGTATTTTGAAACACAAAATGATTACTTTGACATTG
ATTTCCAAAGCTACAAATTACGCTACTTAGGTGAATTTACCGCCAATCAAAAAACGCCACGTTTGCATGGTATTGCCCAC
TCACTTCCTGTTTTATTAATTAAAGGAAATATGGGACAGTCAATTGCGATCTTAGTCGATCAATTGATTGGTTCTCGTTC
ACAAATTGTGGTTAAACCGATTGGTAAGCAATTTGCGGCGATCAATGCGATTGCAGGAGCAACGATATTAGGTGATGGTC
AAGTCTGTTTAATTCTTGATGGACAAAATATTGCACGACAAGTGCAAAGTTCAACTCGTGGTGGTGCGGAACAGTTACAA
CAAGATAAGCAACGTCATCGTGATCAACGCCGTTTGATTATGATTGTCGATGACTCGGTAACTGTACGTAAAGTTACGAC
ACGTTTACTTGAACGACAAGGTTTTGATGTCATCACGGCCAAAGATGGTGTAGATGCGATTGAACAACTTGAAAATGTCA
AACCAGACTTGATGTTACTGGATATTGAAATGCCACGTATGGACGGCTTCGAAGTGACGAATCTTGTACGTCACCACGAA
GTACATCGTGACTTACCAATTATTATGATTACATCACGTACTGGTGAAAAGCATCGTGAACGTGCCTTTAGCTTAGGCGT
GACCAATTATATGGGTAAACCATTCCAAGAAGCAGATTTATTGCAAAATATTGATGCTTTGTTGACGGTTAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

59.313

100

0.602


Multiple sequence alignment