Detailed information NTG0310676

Bioinformatically predicted

Overview

• Name: comF
• Type: Machinery gene
• Locus tag: BEN71_RS02350
• Genome accession: NZ_CP031716
• Coordinates: 358463..358894 (+)
• Length: 143 a.a.
• NCBI ID: WP_068973810.1
• Uniprot ID: -
• Organism: Acinetobacter wuhouensis strain WCHA60
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 353463..363894

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BEN71_RS02335 (BEN71_02335)	-	353506..354255 (+)	750	WP_068973812.1	PilX N-terminal domain-containing pilus assembly protein	-
BEN71_RS02340 (BEN71_02340)	-	354286..357963 (+)	3678	WP_086322676.1	PilC/PilY family type IV pilus protein	-
BEN71_RS02345 (BEN71_02345)	comE	357976..358476 (+)	501	WP_068973811.1	type IV pilin protein	Machinery gene
BEN71_RS02350 (BEN71_02350)	comF	358463..358894 (+)	432	WP_068973810.1	type IV pilin protein	Machinery gene
BEN71_RS02355 (BEN71_02355)	rpsP	359037..359294 (+)	258	WP_068973809.1	30S ribosomal protein S16	-
BEN71_RS02360 (BEN71_02360)	rimM	359337..359885 (+)	549	WP_068973808.1	ribosome maturation factor RimM	-
BEN71_RS02365 (BEN71_02365)	trmD	359940..360686 (+)	747	WP_068973807.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
BEN71_RS02370 (BEN71_02370)	rplS	360825..361196 (+)	372	WP_068973806.1	50S ribosomal protein L19	-
BEN71_RS02375 (BEN71_02375)	-	361264..362232 (-)	969	WP_068973805.1	triacylglycerol lipase	-
BEN71_RS02380 (BEN71_02380)	-	362380..363339 (-)	960	WP_068973804.1	triacylglycerol lipase	-

Sequence

Protein

• Length: 143 a.a.
• Molecular weight: 15492.74 Da
• Isoelectric Point: 9.9494

>NTDB_id=310676 BEN71_RS02350 WP_068973810.1 358463..358894(+) (comF) [Acinetobacter wuhouensis strain WCHA60]
MKNGNQVGFTLIELMIVVAIIAILAAIAYPSYTQYKIRTNRADVQNEMMRVAQRMQSYKAVNNNYTSATLAGIGGSSTYP
STSPVYDLTLQTTAQTWTLTARPKAGTSQAGNGVICLNNLGQKYWVKAVTACALSVTSTWDGR

Nucleotide

• Length: 432 bp

>NTDB_id=310676 BEN71_RS02350 WP_068973810.1 358463..358894(+) (comF) [Acinetobacter wuhouensis strain WCHA60]
ATGAAAAATGGTAATCAAGTCGGTTTTACTTTAATTGAATTAATGATTGTTGTTGCTATTATTGCAATATTGGCGGCTAT
TGCTTACCCATCGTATACTCAGTATAAGATTAGAACAAATAGAGCTGATGTGCAAAATGAAATGATGCGTGTAGCTCAAC
GAATGCAAAGTTATAAAGCAGTTAATAATAATTATACAAGTGCGACACTCGCGGGAATAGGTGGGAGTAGTACATATCCT
AGTACTTCGCCAGTTTATGATTTAACTTTGCAAACAACAGCTCAAACATGGACGCTTACTGCGAGACCAAAGGCCGGAAC
TAGTCAGGCAGGAAATGGAGTTATTTGCTTGAATAATTTAGGTCAGAAATATTGGGTTAAAGCTGTAACTGCATGTGCTC
TATCAGTCACATCTACGTGGGATGGTCGTTAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (8-29)

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (30-116)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comF	Acinetobacter baylyi ADP1	61.151	97.203	0.594
pilE	Acinetobacter baumannii D1279779	56.643	100	0.566