Detailed information    

insolico Bioinformatically predicted

Overview

Name   comN   Type   Machinery gene
Locus tag   CH639_RS00290 Genome accession   NZ_CP031678
Coordinates   57643..58155 (-) Length   170 a.a.
NCBI ID   WP_011272299.1    Uniprot ID   Q4QLX0
Organism   Haemophilus influenzae strain P679-2791     
Function   type IV pilus biogenesis and function (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 52643..63155
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CH639_RS00275 (CH639_00275) comQ 55964..56251 (-) 288 WP_021034778.1 DUF5374 domain-containing protein Machinery gene
  CH639_RS00280 (CH639_00280) comP 56244..56927 (-) 684 WP_011272301.1 DUF2572 family protein Machinery gene
  CH639_RS00285 (CH639_00285) comO 56924..57643 (-) 720 WP_011272300.1 PulJ/GspJ family protein Machinery gene
  CH639_RS00290 (CH639_00290) comN 57643..58155 (-) 513 WP_011272299.1 pilus assembly FimT family protein Machinery gene
  CH639_RS00295 (CH639_00295) suhB 58355..59167 (+) 813 WP_011272298.1 inositol-1-monophosphatase -
  CH639_RS00300 (CH639_00300) nrfE 59276..61183 (+) 1908 WP_011272297.1 heme lyase NrfEFG subunit NrfE -
  CH639_RS00305 (CH639_00305) - 61183..61713 (+) 531 WP_005688388.1 DsbE family thiol:disulfide interchange protein -
  CH639_RS00310 (CH639_00310) nrfF 61710..62852 (+) 1143 WP_005688390.1 heme lyase NrfEFG subunit NrfF -

Sequence

Protein


Download         Length: 170 a.a.        Molecular weight: 19874.13 Da        Isoelectric Point: 8.7271

>NTDB_id=309766 CH639_RS00290 WP_011272299.1 57643..58155(-) (comN) [Haemophilus influenzae strain P679-2791]
MQKGVTLVELLIGLAIISIVLSFVVPLWQTDSPKTILAKEQHRLYLFLRQIQVRAENSSEVWFLLINRNLATQQWCLTAQ
VKNNQTCDCLNPINCPKEVYAHFYYPYFPNKTMIQSHHIYPKEITRFDGIRNTIVTRCFILQAENERTLFLFFNVGSIRL
KTNQFDSACN

Nucleotide


Download         Length: 513 bp        

>NTDB_id=309766 CH639_RS00290 WP_011272299.1 57643..58155(-) (comN) [Haemophilus influenzae strain P679-2791]
ATGCAGAAAGGTGTGACATTAGTGGAATTATTGATTGGATTAGCAATCATCAGCATTGTGCTGAGTTTTGTCGTGCCATT
ATGGCAAACCGATTCACCTAAAACGATTTTAGCCAAAGAGCAACATCGCTTGTATTTATTTCTACGACAAATTCAGGTTC
GTGCAGAAAATTCATCGGAAGTGTGGTTTTTACTTATCAATCGGAACCTTGCGACACAACAATGGTGCTTAACGGCACAA
GTAAAAAATAACCAAACTTGTGATTGTTTAAATCCGATAAATTGCCCGAAAGAGGTTTATGCGCATTTTTACTATCCTTA
TTTTCCTAATAAAACGATGATTCAAAGCCATCATATTTATCCAAAAGAAATCACGAGATTTGATGGCATTCGTAATACTA
TCGTTACTCGTTGCTTTATTTTGCAAGCAGAAAATGAACGTACGTTATTTTTATTTTTCAATGTTGGCAGTATTCGTTTA
AAAACCAATCAATTTGATAGTGCTTGTAATTAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-24)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q4QLX0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comN Haemophilus influenzae Rd KW20

95.882

100

0.959

Multiple sequence alignment