Detailed information NTG0030813

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: NT05HA_RS01440
• Genome accession: NC_012913
• Coordinates: 323525..324865 (+)
• Length: 446 a.a.
• NCBI ID: WP_012771273.1
• Uniprot ID: -
• Organism: Aggregatibacter aphrophilus NJ8700
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 318525..329865

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NT05HA_RS01420 (NT05HA_0320)	lrp	319532..320011 (+)	480	WP_005702602.1	leucine-responsive transcriptional regulator Lrp	-
NT05HA_RS11930 (NT05HA_0321)	-	320029..322784 (+)	2756	Protein_283	DNA translocase FtsK	-
NT05HA_RS01435 (NT05HA_0323)	lolA	322895..323512 (+)	618	WP_005702604.1	outer membrane lipoprotein chaperone LolA	-
NT05HA_RS01440 (NT05HA_0324)	rarA	323525..324865 (+)	1341	WP_012771273.1	replication-associated recombination protein A	Machinery gene
NT05HA_RS01445 (NT05HA_0325)	-	325270..326937 (-)	1668	WP_012771274.1	anaerobic C4-dicarboxylate transporter	-
NT05HA_RS01450 (NT05HA_0326)	serS	327236..328543 (+)	1308	WP_012771275.1	serine--tRNA ligase	-

Sequence

Protein

• Length: 446 a.a.
• Molecular weight: 49886.96 Da
• Isoelectric Point: 7.1095

>NTDB_id=30813 NT05HA_RS01440 WP_012771273.1 323525..324865(+) (rarA) [Aggregatibacter aphrophilus NJ8700]
MSNFSFDFNENDFRPLAARMRPTTLAQYCGQSHLLGEGKPLRKAIEAGYVHSMIFWGPPGTGKTTLAEIIAQRINAEVER
ISAVTSGIKEIRKAIEKAKQNKLAGLRTILFVDEVHRFNKSQQDAFLPHIEDGTIIFIGATTENPSFELNNALLSRARVY
ILKPLSTQEIERVLQQAIDDQENGLGKVRLDLQENLLSLLAEYVNGDARLALNCLEMMVDMAAESKNGKILDRTLLTEVL
GERQARFDKQGDRFYDFISALHKSIRGSAPDAALYWYARIITAGGDPLYVARRLLAIASEDVGNADPRAMQVAIAAWDCF
TRVGAAEGERAIAQAIVYLAVAPKSNAVYLAFKAAKKLATESADFDVPEHLRNAPTNLMKDLGFGAEYRYAHDEPNAYAA
GENYFPPQLKDTQFYFPTTRGMEIKIKEKLEWLKGLDQESQKKRYK

Nucleotide

• Length: 1341 bp

>NTDB_id=30813 NT05HA_RS01440 WP_012771273.1 323525..324865(+) (rarA) [Aggregatibacter aphrophilus NJ8700]
ATGTCCAACTTCAGCTTTGATTTTAACGAAAATGATTTCCGTCCGCTCGCCGCAAGAATGCGTCCAACCACATTGGCGCA
ATATTGCGGTCAGTCTCATTTATTGGGTGAAGGCAAACCGTTACGCAAAGCCATTGAGGCGGGATACGTCCATTCCATGA
TTTTCTGGGGGCCACCCGGCACCGGAAAAACCACTTTGGCAGAGATTATCGCTCAACGCATTAACGCTGAAGTCGAGCGA
ATTTCTGCGGTCACCAGTGGCATTAAAGAAATTCGTAAAGCCATTGAAAAAGCCAAACAAAACAAATTGGCGGGTCTGCG
CACCATTTTGTTTGTGGACGAAGTTCACCGTTTCAACAAAAGCCAGCAAGACGCGTTTCTGCCACATATCGAAGACGGCA
CCATTATTTTTATTGGTGCCACCACGGAAAATCCTTCTTTTGAATTAAATAACGCGCTACTTTCCCGCGCACGGGTTTAT
ATTCTCAAACCGCTTTCTACGCAGGAAATTGAACGCGTTTTGCAACAAGCGATCGACGATCAGGAAAATGGCTTGGGCAA
AGTGCGGTTAGATTTGCAGGAGAATTTGTTGTCGCTTTTGGCAGAATACGTCAACGGCGATGCACGCCTTGCGTTGAACT
GTTTGGAAATGATGGTGGACATGGCCGCTGAATCCAAAAACGGCAAAATTTTAGACCGCACTTTACTTACGGAAGTGTTG
GGCGAACGGCAGGCGCGTTTTGATAAACAAGGCGATCGTTTCTACGATTTCATTTCCGCGCTACATAAATCCATTCGCGG
ATCCGCACCGGATGCGGCGCTCTATTGGTATGCCCGCATTATCACTGCCGGCGGTGATCCGCTTTACGTGGCTCGCCGTT
TATTGGCGATTGCCTCGGAAGATGTGGGTAATGCCGATCCGCGTGCGATGCAGGTTGCCATTGCTGCATGGGATTGTTTT
ACCCGTGTCGGTGCCGCCGAAGGCGAACGCGCGATTGCGCAAGCTATTGTCTATTTAGCCGTTGCGCCAAAAAGCAACGC
TGTTTACCTCGCCTTCAAAGCAGCGAAAAAACTGGCGACTGAATCTGCTGATTTTGATGTGCCGGAACACCTCCGCAACG
CCCCAACCAATCTCATGAAAGACCTCGGCTTCGGTGCCGAATACCGCTACGCCCACGACGAACCCAACGCCTACGCCGCC
GGCGAAAACTACTTCCCGCCACAACTCAAAGACACCCAATTTTATTTCCCTACTACAAGAGGCATGGAGATTAAGATTAA
GGAAAAGTTGGAGTGGTTAAAAGGGCTAGATCAGGAAAGTCAGAAGAAACGATATAAATAG

Domains

Predicted by InterProScan.

• ATPase family associated with various cellular activities (AAA) (AAA) (53-163)

• MgsA AAA+ ATPase C terminal (MgsA_C) (267-433)

• AAA C-terminal domain (AAA_assoc_2) (189-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	39.416	92.152	0.363