Detailed information    

insolico Bioinformatically predicted

Overview


Name   proC   Type   Machinery gene
Locus tag   A2J15_RS01600 Genome accession   NZ_CP031611
Coordinates   322602..323306 (-) Length   234 a.a.
NCBI ID   WP_066778869.1    Uniprot ID   A0A6A7JRL2
Organism   Campylobacter hepaticus strain HV10     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 317602..328306
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A2J15_RS01565 (A2J15_001565) - 318477..319163 (+) 687 WP_066778760.1 endonuclease III domain-containing protein -
  A2J15_RS01570 (A2J15_001570) thiD 319160..319972 (+) 813 WP_066778763.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  A2J15_RS01575 (A2J15_001575) thiE 319962..320594 (+) 633 WP_066778764.1 thiamine phosphate synthase -
  A2J15_RS01580 (A2J15_001580) - 320572..321201 (+) 630 WP_066778766.1 uroporphyrinogen-III synthase -
  A2J15_RS01585 (A2J15_001585) - 321198..321650 (-) 453 WP_066778768.1 hypothetical protein -
  A2J15_RS01590 (A2J15_001590) - 321647..322306 (-) 660 WP_066778770.1 hypothetical protein -
  A2J15_RS01595 (A2J15_001595) ctsT 322303..322605 (-) 303 WP_066778773.1 transformation system protein Machinery gene
  A2J15_RS01600 (A2J15_001600) proC 322602..323306 (-) 705 WP_066778869.1 pyrroline-5-carboxylate reductase Machinery gene
  A2J15_RS01605 (A2J15_001605) fliW 323332..323721 (-) 390 WP_066778774.1 flagellar assembly protein FliW -
  A2J15_RS01610 (A2J15_001610) bamD 323886..324533 (+) 648 WP_066778777.1 outer membrane protein assembly factor BamD -
  A2J15_RS01615 (A2J15_001615) lon 324547..326922 (+) 2376 WP_066778780.1 endopeptidase La -
  A2J15_RS01620 (A2J15_001620) rpsR 326965..327225 (-) 261 WP_066778782.1 30S ribosomal protein S18 -
  A2J15_RS01625 (A2J15_001625) - 327237..327776 (-) 540 WP_066778784.1 single-stranded DNA-binding protein -
  A2J15_RS01630 (A2J15_001630) rpsF 327785..328162 (-) 378 WP_066778787.1 30S ribosomal protein S6 -

Sequence


Protein


Download         Length: 234 a.a.        Molecular weight: 25875.04 Da        Isoelectric Point: 7.1876

>NTDB_id=307925 A2J15_RS01600 WP_066778869.1 322602..323306(-) (proC) [Campylobacter hepaticus strain HV10]
MAKALAYGLKNDYEIYIVGRNLEKLQILAQEGFKILLYQDFNIQDKDIILAFKPYALENISKCLKGQARILISVLANTDF
EKLQVIHAQNYVRIMPNIAAKYQASTTPYILKNSLFNNEILEILNTFGLAYELENEEQMGAAMAISGCAPAFLALVAESI
ANAGVCEGLPKELSLNLTRSLFQSSSTLLKHEHPAIIRENICSPSGVTIKGIKVLEQKGVRGSFFEAINASNTK

Nucleotide


Download         Length: 705 bp        

>NTDB_id=307925 A2J15_RS01600 WP_066778869.1 322602..323306(-) (proC) [Campylobacter hepaticus strain HV10]
ATGGCAAAAGCTTTAGCCTATGGATTAAAAAATGATTATGAAATCTACATAGTAGGAAGAAATTTAGAGAAACTTCAAAT
ATTAGCCCAAGAGGGTTTTAAAATTTTACTTTATCAAGATTTTAATATACAAGATAAAGACATAATTTTAGCTTTTAAAC
CCTATGCTTTAGAAAATATATCTAAGTGTTTAAAAGGTCAAGCACGCATTTTAATTTCTGTTTTAGCTAATACAGATTTT
GAAAAACTACAAGTCATTCATGCTCAAAATTATGTAAGAATCATGCCTAATATAGCGGCCAAATATCAAGCTTCAACCAC
ACCTTATATACTTAAAAATTCTCTTTTTAATAATGAAATTTTAGAAATTTTAAATACTTTTGGTTTAGCCTATGAATTAG
AAAATGAAGAACAAATGGGTGCTGCTATGGCAATTAGTGGTTGCGCTCCCGCTTTTTTAGCTCTCGTAGCAGAAAGTATT
GCTAATGCTGGAGTTTGCGAAGGTTTACCCAAAGAACTTAGCTTAAATCTTACTCGGTCTTTATTTCAAAGTTCAAGTAC
CTTGCTTAAACATGAACATCCAGCCATTATTAGGGAAAATATTTGCTCTCCTAGTGGTGTTACCATAAAAGGTATTAAAG
TACTTGAACAAAAAGGGGTTCGTGGAAGTTTTTTTGAAGCTATAAATGCTAGCAACACTAAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A6A7JRL2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  proC Campylobacter jejuni subsp. jejuni 81-176

82.051

100

0.821


Multiple sequence alignment