Detailed information
Bioinformatically predicted
Overview
| Name | pilM | Type | Machinery gene |
| Locus tag | CCE_RS07455 | Genome accession | NC_010546 |
| Coordinates | 1583177..1584292 (+) | Length | 371 a.a. |
| NCBI ID | WP_009544383.1 | Uniprot ID | B1WXU1 |
| Organism | Crocosphaera subtropica ATCC 51142 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1578177..1589292
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CCE_RS07415 (cce_1570) | surE | 1578291..1579121 (+) | 831 | WP_009544375.1 | 5'/3'-nucleotidase SurE | - |
| CCE_RS07420 (cce_1571) | - | 1579180..1579773 (+) | 594 | WP_009544376.1 | DUF3727 domain-containing protein | - |
| CCE_RS07425 (cce_1572) | - | 1580114..1580446 (+) | 333 | WP_009544377.1 | hypothetical protein | - |
| CCE_RS07430 (cce_1573) | - | 1580651..1580965 (+) | 315 | WP_157861272.1 | hypothetical protein | - |
| CCE_RS07435 (cce_1574) | - | 1581060..1581446 (+) | 387 | WP_009544379.1 | hypothetical protein | - |
| CCE_RS07440 (cce_1575) | - | 1581469..1581897 (+) | 429 | WP_009544380.1 | hypothetical protein | - |
| CCE_RS07445 (cce_1576) | - | 1581903..1582190 (+) | 288 | WP_009544381.1 | hypothetical protein | - |
| CCE_RS25945 | - | 1582426..1582563 (+) | 138 | WP_156922842.1 | hypothetical protein | - |
| CCE_RS07450 (cce_1577) | - | 1582667..1582960 (+) | 294 | WP_009544382.1 | hypothetical protein | - |
| CCE_RS07455 (cce_1578) | pilM | 1583177..1584292 (+) | 1116 | WP_009544383.1 | type IV pilus biogenesis protein PilM | Machinery gene |
| CCE_RS07460 (cce_1579) | - | 1584296..1585024 (+) | 729 | WP_009544384.1 | PilN domain-containing protein | - |
| CCE_RS07465 (cce_1580) | - | 1585021..1585824 (+) | 804 | WP_009544385.1 | hypothetical protein | - |
| CCE_RS07470 (cce_1581) | - | 1585911..1588247 (+) | 2337 | WP_012361671.1 | secretin and TonB N-terminal domain-containing protein | - |
| CCE_RS07475 (cce_1582) | - | 1588322..1589134 (+) | 813 | WP_009544387.1 | PD-(D/E)XK nuclease family protein | - |
Sequence
Protein
Download Length: 371 a.a. Molecular weight: 41036.16 Da Isoelectric Point: 4.3522
>NTDB_id=30466 CCE_RS07455 WP_009544383.1 1583177..1584292(+) (pilM) [Crocosphaera subtropica ATCC 51142]
MLSRIQETIGGLFGGKSDGVGLEITPERLNLAKLTKHGQGYKIAKFCTAEVPEGIFEEGKIVDSPGLAELIQEFLTENKI
KTKRIATAVPMREAIIRIIPVPAELDEAELRDMVLNHEAALYLPYPREEVDLDYQKLGFFEDEDGIEKVQVLLVATRREV
TDSYMDTFGQAGLQIDVLEINSFSVIRTIREQLRQFGSREAAVLVDVEFDSTEIAIVVDGVPQFSRTVPIGTFQMQNALS
RAMNLPPSRNPEILQGMTIPVTQFDSLTTQGTAVNPGMTALMRVLGELTDELRRSINFYLNQSEELEVVQLLLAGPGGGL
VQLDEYFTHRLSLPTMQIDPIAALSLEIDKEIPAVQRPALGTVLGLGLREV
MLSRIQETIGGLFGGKSDGVGLEITPERLNLAKLTKHGQGYKIAKFCTAEVPEGIFEEGKIVDSPGLAELIQEFLTENKI
KTKRIATAVPMREAIIRIIPVPAELDEAELRDMVLNHEAALYLPYPREEVDLDYQKLGFFEDEDGIEKVQVLLVATRREV
TDSYMDTFGQAGLQIDVLEINSFSVIRTIREQLRQFGSREAAVLVDVEFDSTEIAIVVDGVPQFSRTVPIGTFQMQNALS
RAMNLPPSRNPEILQGMTIPVTQFDSLTTQGTAVNPGMTALMRVLGELTDELRRSINFYLNQSEELEVVQLLLAGPGGGL
VQLDEYFTHRLSLPTMQIDPIAALSLEIDKEIPAVQRPALGTVLGLGLREV
Nucleotide
Download Length: 1116 bp
>NTDB_id=30466 CCE_RS07455 WP_009544383.1 1583177..1584292(+) (pilM) [Crocosphaera subtropica ATCC 51142]
ATGTTAAGCCGTATCCAAGAGACCATTGGGGGTTTATTTGGGGGAAAGTCTGATGGGGTAGGTTTAGAAATTACCCCTGA
GAGATTGAACTTAGCTAAACTGACTAAACATGGTCAAGGCTATAAAATAGCCAAATTTTGTACCGCAGAAGTACCTGAAG
GTATTTTTGAAGAAGGAAAAATTGTTGATTCTCCAGGGTTAGCTGAACTAATTCAGGAGTTCTTAACTGAAAACAAAATC
AAGACCAAACGCATTGCCACAGCGGTTCCTATGCGAGAAGCCATTATTCGTATTATACCGGTTCCGGCTGAACTAGATGA
AGCGGAATTGCGAGATATGGTTTTAAACCATGAGGCTGCCTTGTACTTACCCTATCCTAGAGAAGAAGTGGATCTAGACT
ATCAAAAACTAGGTTTCTTTGAAGACGAAGATGGTATTGAAAAAGTGCAAGTCTTACTGGTAGCAACCCGACGGGAAGTC
ACAGACTCCTATATGGATACCTTTGGTCAAGCAGGATTACAAATCGATGTCCTAGAAATCAATAGTTTTTCTGTAATTCG
TACGATTCGCGAACAACTACGGCAATTTGGGTCTAGAGAAGCAGCTGTGTTAGTGGATGTGGAGTTTGATAGTACCGAAA
TTGCCATTGTCGTCGATGGGGTTCCCCAATTTTCTCGAACCGTTCCCATTGGAACCTTTCAGATGCAAAATGCCCTGTCA
CGGGCGATGAATTTACCCCCTTCTCGCAACCCGGAAATTCTGCAAGGAATGACCATTCCTGTTACCCAGTTCGATAGCTT
AACCACCCAAGGAACAGCCGTTAATCCAGGAATGACCGCCTTGATGCGGGTATTAGGAGAATTAACCGACGAGTTACGTC
GTTCCATTAACTTCTACTTAAACCAAAGTGAAGAATTGGAGGTAGTTCAACTCCTATTAGCTGGACCCGGAGGGGGTTTA
GTGCAACTGGATGAATATTTTACCCATCGTCTCAGTTTGCCCACCATGCAAATCGATCCCATTGCTGCTTTATCCTTAGA
AATAGATAAGGAAATCCCTGCTGTCCAACGGCCAGCTTTAGGTACAGTCTTAGGTTTAGGATTACGGGAGGTGTAG
ATGTTAAGCCGTATCCAAGAGACCATTGGGGGTTTATTTGGGGGAAAGTCTGATGGGGTAGGTTTAGAAATTACCCCTGA
GAGATTGAACTTAGCTAAACTGACTAAACATGGTCAAGGCTATAAAATAGCCAAATTTTGTACCGCAGAAGTACCTGAAG
GTATTTTTGAAGAAGGAAAAATTGTTGATTCTCCAGGGTTAGCTGAACTAATTCAGGAGTTCTTAACTGAAAACAAAATC
AAGACCAAACGCATTGCCACAGCGGTTCCTATGCGAGAAGCCATTATTCGTATTATACCGGTTCCGGCTGAACTAGATGA
AGCGGAATTGCGAGATATGGTTTTAAACCATGAGGCTGCCTTGTACTTACCCTATCCTAGAGAAGAAGTGGATCTAGACT
ATCAAAAACTAGGTTTCTTTGAAGACGAAGATGGTATTGAAAAAGTGCAAGTCTTACTGGTAGCAACCCGACGGGAAGTC
ACAGACTCCTATATGGATACCTTTGGTCAAGCAGGATTACAAATCGATGTCCTAGAAATCAATAGTTTTTCTGTAATTCG
TACGATTCGCGAACAACTACGGCAATTTGGGTCTAGAGAAGCAGCTGTGTTAGTGGATGTGGAGTTTGATAGTACCGAAA
TTGCCATTGTCGTCGATGGGGTTCCCCAATTTTCTCGAACCGTTCCCATTGGAACCTTTCAGATGCAAAATGCCCTGTCA
CGGGCGATGAATTTACCCCCTTCTCGCAACCCGGAAATTCTGCAAGGAATGACCATTCCTGTTACCCAGTTCGATAGCTT
AACCACCCAAGGAACAGCCGTTAATCCAGGAATGACCGCCTTGATGCGGGTATTAGGAGAATTAACCGACGAGTTACGTC
GTTCCATTAACTTCTACTTAAACCAAAGTGAAGAATTGGAGGTAGTTCAACTCCTATTAGCTGGACCCGGAGGGGGTTTA
GTGCAACTGGATGAATATTTTACCCATCGTCTCAGTTTGCCCACCATGCAAATCGATCCCATTGCTGCTTTATCCTTAGA
AATAGATAAGGAAATCCCTGCTGTCCAACGGCCAGCTTTAGGTACAGTCTTAGGTTTAGGATTACGGGAGGTGTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilM | Synechocystis sp. PCC 6803 |
81.351 |
99.73 |
0.811 |